[R-sig-Geo] spatially balanced sampling to reduce geo-political bias
Claire Teeling
CXT755 at bham.ac.uk
Sat May 29 11:43:03 CEST 2010
Dear all,
I am carrying out some species distribution modelling based on a database of
species occurrence records of a single tree species, encompassing the entire European
continent. The records are primarily historical and heavily biased towards
western, northern Europe. A few of the counts of records by country are shown
below to illustrate.
CHE 12
CZE 1
DEN 6
DEU 1742
DNK 12
ESP 237
FIN 1
FRA 6536
GBR 3294
GEO 39
GRC 47
HUN 2
I am very new to R and I'm trying to find a way to subsample in order to obtain
a more spatially balanced sample of 300 records, from a total of 16794. I have
looked at some packages, e.g. sp, spcosa, spsurvey, spdep, have searched the
manuals and searched for similar examples.
I have also tried to stratify the data but can't find a stratum which reduces
the impact of the bias. I also have a field containing inclusion probabilities
for each record, based on country.
I just can't seem to work out how best to perform sampling to reduce the effect
of geopolitical bias.
Any advice, for an R novice, would be very gratefully received.
Thanks,
Claire
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