[R-sig-Geo] Ang. Re: Missing library

[Roger Bivand]

On Thu, 20 Nov 2008, Mikael Carlsson wrote:

> Couldn't load using library(spatstat)
> got this error:
>> library(spatstat)
> Error in dyn.load(file, DLLpath = DLLpath, ...) :
>  unable to load shared library
> '/usr/local/R-2.8.0/lib/R/library/spatstat/libs/spatstat.so':
>  ld.so.1: R: fatal: relocation error: file
> /usr/local/R-2.8.0/lib/R/library/spatstat/libs/spatstat.so: symbol
> __gxx_personality_v0: referenced symbol not found

As I wrote earlier, resolve this problem first. I suggest reinstalling 
spatstat on your current system - you have most likely updated the g++ 
libraries since spatstat was installed.

Roger

> Error in library(spatstat) : .First.lib failed for 'spatstat'
>>
>
> Regards,
> /M
>
>
>
> Roger Bivand <Roger.Bivand at nhh.no>
> 2008-11-20 13:33
> Sänd svar till
> Roger.Bivand at nhh.no
>
>
> Till
> Mikael Carlsson <Mikael.Carlsson at sgu.se>
> Kopia
> r-sig-geo at stat.math.ethz.ch
> Ärende
> Re: [R-sig-Geo] Missing library
>
>
>
>
>
>
> On Thu, 20 Nov 2008, Mikael Carlsson wrote:
>
>> Hello!
>>
>> I'm running R2.8.0 , Solaris and a Sparc machine
>>
>> Get the following error, and don't know what to do...
>
> The problem is in loading spatstat. Can you load spatstat manually:
>
> library(spatstat)
>
> When that works, the coercion should work too. I expect that spatstat
> isn't installed adequately (built against an older version of some
> library, probably the g++ runtime library from googling on the missing
> function).
>
> Roger
>
>>
>> Regards,
>> Mikael
>> - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
> -
>> - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
> -
>> - - - - - - - - - - - - - - - - - - - - - -
>> library(akima)
>> library(maptools)
>> library(sp)
>>
>> cumark <- read.table("sydnorr5000.txt", header=T, sep = ";")
>> attach(cumark)
>> vew <- as.vector(ew)
>> vns <- as.vector(ns)
>> vcu <- as.vector(cu)
>>
>> fcumark <- data.frame(vew, vns, vcu)
>>
>> coordinates(fcumark) <- ~vew+vns
>>
>> L1 <-round((max(vew)- min(vew))/100,0)
>> L2 <-round((max(vns)- min(vns))/100,0)
>>
>>
>> fcumark.interp.old <- interp.old(vew, vns, vcu,
>>                xo= seq(min(vew), max(vew), length = L1),
>>                yo= seq(min(vns), max(vns), length = L2),
>>                ncp = 0,
>>                extrap= FALSE,
>>                duplicate = "mean",
>>                dupfun = NULL)
>>
>> fcumark.interp.old.grid <-
>> as.SpatialGridDataFrame.im(as.im(fcumark.interp.old))
>>
>> Loading required package: deldir
>> deldir 0.0-7
>> Error in dyn.load(file, DLLpath = DLLpath, ...) :
>>  unable to load shared library
>> '/usr/local/R-2.8.0/lib/R/library/spatstat/libs/spatstat.so':
>>  ld.so.1: R: fatal: relocation error: file
>> /usr/local/R-2.8.0/lib/R/library/spatstat/libs/spatstat.so: symbol
>> __gxx_personality_v0: referenced symbol not found
>> Error in as.SpatialGridDataFrame.im(as.im(fcumark.interp.old)) :
>>  could not find function "as.im"
>>
>> (program stop!)
>>
>>                [[alternative HTML version deleted]]
>>
>> _______________________________________________
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>>
>
>

-- 
Roger Bivand
Economic Geography Section, Department of Economics, Norwegian School of
Economics and Business Administration, Helleveien 30, N-5045 Bergen,
Norway. voice: +47 55 95 93 55; fax +47 55 95 95 43
e-mail: Roger.Bivand at nhh.no