[R-sig-Geo] Problem installing gstat into R

Edzer Pebesma e.pebesma at gmail.com
Wed Dec 12 09:20:59 CET 2007


Edward,

My experiences here are limited; what I always do to install a source 
package is something like:

R CMD INSTALL -l /home/edzer/S/library R/gstat_0.9-42.tar.gz

Could you please verify whether that works?
--
Edzer

Edward Tomlinson wrote:
> Hi List,
>
> I am not entirely sure where i should be asking this question so i will
> start here.
>
> I am trying to install the gstat package into R so it can be used by a
> component of GRASS.
>
> However i cannot get gstat installed. I have already installed spgrass6
> package and its dependencies, however gstat will not install. Details below.
>
> Any ideas would be appreciated.
>
> Further info...
>
> I downloaded and installed from source. Original files came from CRAN
> website.
>
> I followed instructions from Install and Admin manual. It suggested to build
> in the following way...
>
> ./configure --disable-nls --disable-mbcs --enable-R-shlib
> make
>
> Everything worked fine. I have been able to install other packages for R
> such as maptools, spgrass6 and its dependencies.
>
> Thanks,
> Ed
>
> R version 2.6.1 (2007-11-26)
> Copyright (C) 2007 The R Foundation for Statistical Computing
> ISBN 3-900051-07-0
>
>   
>> install.packages("gstat")
>>     
> ...
> Content type 'application/x-tar' length 895559 bytes (874 Kb)
> opened URL
> ==================================================
> downloaded 874 Kb
>
> /usr/local/lib/R/library
> * Installing *source* package 'gstat' ...
> ....
> gcc -std=gnu99 -shared -L/usr/local/lib -o gstat.dll block.o chfactor.o
> copy.o d
> ata.o direct.o err.o fit.o getest.o gls.o glvars.o hsehldr.o init.o ivecop.olex
> .o lm.o lufactor.o machine.o mapio.o matop.o matrixio.o meminfo.o memory.omemst
> at.o msim.o norm.o nsearch.o otherio.o parse.o plot.o polygon.o pqueue.opredict
> .o pxop.o qrfactor.o random.o read.o reml.o report.o s.o select.o sem.o
> sim.o so
> lve.o sparse.o sparseio.o spbkp.o spchfctr.o splufctr.o sprow.o spswap.o
> stat.o
> submat.o userio.o utils.o vario.o vario_fn.o vario_io.o vecop.o version.owritec
> md.o xvalid.o   -L/usr/local/lib/R/lib -lR
> s.o: In function `gstat_predict':
> /tmp/R.INSTALL.uA1352/gstat/src/s.c:495: undefined reference to
> `_R_ProcessEvent
> s'
> /tmp/R.INSTALL.uA1352/gstat/src/s.c:517: undefined reference to
> `_R_ProcessEvent
> s'
> Info: resolving _R_NaReal by linking to __imp__R_NaReal (auto-import)
> Info: resolving _R_DimSymbol by linking to __imp__R_DimSymbol (auto-import)
> collect2: ld returned 1 exit status
> make: *** [gstat.dll ] Error 1
> chmod: cannot access `/usr/local/lib/R/library/gstat/libs/*': No such file
> or di
> rectory
> ERROR: compilation failed for package 'gstat'
> ** Removing '/usr/local/lib/R/library/gstat'
>
>
> Warning message:
> In install.packages("gstat") :
>   installation of package 'gstat' had non-zero exit status
>   
>
> 	[[alternative HTML version deleted]]
>
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