[R-sig-Geo] error in loading rgdal

[Tim Keitt]

This is probably a version mismatch. I've not kept track of which GDAL
is needed these days to work with rgdal. If that's not it, you may need
to compile locally as pre-built binaries don't always work. We should
probably convert everything in rgdal to use the GDAL C interface rather
than the C++ interface. It would be a bit more portable and stable.

THK

On Tue, 2005-07-05 at 15:22 -0700, hanas at u.washington.edu wrote:
> Would anybody have an advice on the following error when loading rgdal?
> 
> > library(rgdal)
> Loading required package: abind
> Loading required package: pixmap
> Error in dyn.load(x, as.logical(local), as.logical(now)) :
>         unable to load shared library 
> '/net/home/hana/lib/rgdal/libs/rgdal.so':
>   /net/home/hana/lib/rgdal/libs/rgdal.so: undefined symbol: 
> _ZN14GDALRasterBand17GetRasterDataTypeEv
> Error in library(rgdal) : .First.lib failed for 'rgdal'
> 
> It is installed on Debian Sarge, Kernel 2.4.26-om1. GDAL is installed from 
> sources via FWTools-linux-0.9.8 which seems to work:
> 
> $ gdalinfo --version
> GDAL 1.2.6.0, released 2005/03/13
> 
> and
> 
> $ ldd /net/home/hana/lib/rgdal/libs/rgdal.so
> 
> libgdal.so.1 => /net/home/hana/lib/FWTools-linux-0.9.8/lib/libgdal.so.1 (0x40006000)
> libR.so => /net/home/hana/lib/libR.so (0x4076c000)
> libstdc++.so.5 => /net/home/hana/lib/FWTools-linux-0.9.8/lib/libstdc++.so.5 (0x40776000)
> libm.so.6 => /lib/libm.so.6 (0x40823000)
> libgcc_s.so.1 => /lib/libgcc_s.so.1 (0x40845000)
> libc.so.6 => /lib/libc.so.6 (0x4084e000)
> libpq.so.2 => /net/home/hana/lib/FWTools-linux-0.9.8/lib/libpq.so.2 (0x40981000)
> libgeos.so.2 => /net/home/hana/lib/FWTools-linux-0.9.8/lib/libgeos.so.2 (0x4098f000)
> libxerces-c.so.26 => /net/home/hana/lib/FWTools-linux-0.9.8/lib/libxerces-c.so.26 (0x40a8d000)
> libpthread.so.0 => /lib/libpthread.so.0 (0x40dc3000)
> libNCSEcw.so => /net/home/hana/lib/FWTools-linux-0.9.8/lib/libNCSEcw.so (0x40e14000)
> libogdi31.so => /net/home/hana/lib/FWTools-linux-0.9.8/lib/libogdi31.so (0x40f53000)
> libjpeg.so => /net/home/hana/lib/FWTools-linux-0.9.8/lib/libjpeg.so (0x40f70000)
> libgeotiff.so => /net/home/hana/lib/FWTools-linux-0.9.8/lib/libgeotiff.so (0x40f8d000)
> libtiff.so.3 => /net/home/hana/lib/FWTools-linux-0.9.8/lib/libtiff.so.3 (0x40fb2000)
> libpng.so.2 => /net/home/hana/lib/FWTools-linux-0.9.8/lib/libpng.so.2 (0x40ff9000)
> libgrass5.so.0 => /net/home/hana/lib/FWTools-linux-0.9.8/lib/libgrass5.so.0 (0x41023000)
> libz.so => /net/home/hana/lib/FWTools-linux-0.9.8/lib/libz.so (0x410a9000)
> libdl.so.2 => /lib/libdl.so.2 (0x410bb000)
> libkdu.so => /net/home/hana/lib/FWTools-linux-0.9.8/lib/libkdu.so (0x410be000)
> libcurl.so.2 => /net/home/hana/lib/FWTools-linux-0.9.8/lib/libcurl.so.2 (0x41137000)
> libsqlite3.so.0 => /net/home/hana/lib/FWTools-linux-0.9.8/lib/libsqlite3.so.0 (0x41156000)
> /lib/ld-linux.so.2 => /lib/ld-linux.so.2 (0x80000000)
> libcrypt.so.1 => /lib/libcrypt.so.1 (0x41199000)
> libresolv.so.2 => /lib/libresolv.so.2 (0x411c6000)
> libnsl.so.1 => /lib/libnsl.so.1 (0x411d8000)
> librt.so.1 => /lib/librt.so.1 (0x411ee000)
> libNCSCNet.so => /net/home/hana/lib/FWTools-linux-0.9.8/lib/libNCSCNet.so (0x41201000)
> libNCSUtil.so => /net/home/hana/lib/FWTools-linux-0.9.8/lib/libNCSUtil.so (0x4121b000)
> libexpat_ogdi31.so => /net/home/hana/lib/FWTools-linux-0.9.8/lib/libexpat_ogdi31.so (0x4122e000)
> libproj.so.0 => /net/home/hana/lib/FWTools-linux-0.9.8/lib/libproj.so.0 (0x4124f000)
> 
> Thanks for any help,
> Hana
> 
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-- 
Tim Keitt
Section of Integrative Biology
http://www.keittlab.org/