[R-sig-Epi] Epi 1.1.71 is now out
BXC (Bendix Carstensen)
bxc at steno.dk
Sat Sep 19 17:16:41 CEST 2015
Dear all,
the latest version of Epi, version 1.1.71 is now avialble on CRAN.
best regards,
Bendix Carstesen,
maintainer
The changes since 1.1.60 (the previous version on CRAN was 1.1.67) are:
Changes in 1.1.71
o Bug from calling lme4::vcov from within ci.lin fixed
Changes in 1.1.70
o Bug in calling lme4::fixef from within ci.lin fixed
o ci.lin with sample=TRUE now samples from the posterior of the
parameter vector and then transforms this by the contrast matrix
(earlier the sampling was from the posterior of the ctr.mat
transformed parameters).
Changes in 1.1.69
o ci.cum now has an argument ci.Exp (defaults to FALSE) that computes
the ci of the cum.haz on the log-scale. This is useful if you want to
transform c.i.s to the survival scale and want the c.i.s for the
survival function to stay inside [0,1].
o ci.pred updated to automatically use the inverse link for
transformation of results. Also now only accepts glm objects.
o Ns now have arguents ref= and detrend=. ref= allows a reference
value to be specified (where the Ns is 0); this is independent of
the supplied data. detrend= projects the columns of Ns() on the
orthogonal of the variable supplied; this is strongly dependent on
the data.
Changes in 1.1.68
o ci.lin has been groomed to use internally (newly, from 1.1.68)
defined methods COEF and VCOV to extract coefficients and
variance-covariances of these from different types of objects.
Changes in 1.1.67
o The simLexis vignette has been groomed a bit
o The function ci.pred (a wrapper for predict.glm) added
Changes in 1.1.66
o A crr.Lexis method has been added to simplify the use of the
Fine-Gray model when data are set up in a Lexis object.
o ci.lin and ci.exp now recognises crr objects.
o A wrapper, ci.pred, for predict.glm has been added, it returns
predictions with confidence intervals.
Changes in 1.1.65
o Despite the note, dropped rows from construction of a Lexis objects
were not put in the "dropped" attribute.
Changes in 1.1.64
o Fixed the sim-Lexis vignette
Changes in 1.1.64
o Added function ZArray, which generates an array of 0s just as NArray
generates an array of NAs.
o Updated code to avoid "::" and ":::" as far as possible, as well as
"<<-". Hence excluded records from construction of a Lexis object is
now put in an attribute "dropped" of the Lexis object.
Changes in 1.1.62
o Bug fix in the example code for boxes.Lexis
Changes in 1.1.61
o ci.lin updated to recognize objects of class "lmerMod" from lmer.
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