What Jari meant was if you use `betadisper()` on your data then it will
give you an object that has a `plot()` method which will give you something
of relevance to what `adonis()` and the whole PERMANOVA method is doing. It
plots the groups centroids and dispersions of the groups in principal
coordinates space. I don't have easy access to that journal at the minute,
but will look when I get back from this conference next week.

You can see how `betadisper` and its `plot` method works in the mean time
if you want to customise how things are plotted.

Gavin

On 9 August 2013 06:54, <Jonas.Persson@niva.no> wrote:

> Hi all
>
> I'd like to plot my results from adonis (vegan). Internet searches found
> me an older post here in which Jari Oksanen wrote: "adonis() does not have
> plot method, but  you can use betadisper for plots." But I'm afraid I
> don't understand how to do it this way.
>
> How can I a) make a plot of adonis results? b) manipulate the layout of
> adonis/betadispers figures to my liking?
> My main inspiration for both adonis and betadispers results plotting is
> Friberg et al (2013) Hydrol. Process. 27, 734?740, so I'd like to be able
> to produce something similar.
>
> Cheers,
> Jonas
>
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-- 

Gavin Simpson, PhD

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