Alan,
It will consider all three dimensions if you include ", choices=c(1:3), " in your call to envfit.
Dan



________________________________
 From: Alan Haynes <aghaynes@gmail.com>
To: r-sig-ecology@r-project.org 
Sent: Tuesday, February 7, 2012 12:00 PM
Subject: [R-sig-eco] envfit on 3rd dimension

Dear list,

Im using envfit() on an rda object and would like to know if it considers
the 3rd dimension in its comparisons of factor centroids. Based on the
output giving only PCs 1 and 2 for vectors and factors, Im guessing not.

Is there a way to get the info on the third dimension?


Thanks in advance

Alan


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Email: aghaynes@gmail.com
Mobile: +41794385586
Skype: aghaynes

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