[R-sig-eco] Advanicng in R for ecologists
Oliver Hooker
oliverhooker @ending from pr@t@ti@tic@@com
Thu Nov 29 17:48:48 CET 2018
Advancing in statistical modelling for evolutionary biologists and
ecologists using R (ADVR08)
https://www.prstatistics.com/course/advancing-statistical-modelling-using-r-advr08/
This course will be delivered by Dr. Luc Bussiere from the 21st 25th
January 2019 in Glasgow City Centre
Course Overview:
This course will provide an introduction to working with real-life data
typical of those encountered in the field of evolutionary biology and
ecology. The course will be delivered by Dr. Luc Bussiere, Dr. Tom Houslay
and Dr. Ane Timenes Laugen who are all practicing academics in the field of
evolutionary biology. This five day course will consist of series of
modules (each lasting roughly half a day) covering model selection and
simplification, generalised linear models, mixed effects models, and
non-linear models. Along the way you will gain in depth experience in data
‘wrangling’, data and model visualisation and plotting, as well as
exploring and understanding model diagnostics.
Classes will comprises of a mixture of lectures and practicals designed to
either build required skills for future modules or to perform a family of
analyses that is frequently encountered in the biological literature.
Course programme
Monday 21st – Classes from 09:30 to 17:30
Course introduction; techniques for data manipulation, aggregation, and
visualisation; introduction to linear regression. Packages: {tidyr},
{dplyr}, {ggplot2}
Tuesday 22nd – Classes from 09:30 to 17:30
Linear models (diagnostics, collinearity, scaling, plotting fitted values);
fitting and interpreting interaction terms; model selection and
simplification; general linear models and ANCOVA.
Packages: {stats}, {car}
Wednesday 23rd – Classes from 09:30 to 17:30
Generalized linear models (logistic and Poisson regression); predicting
using model objects and visualizing model fits. Packages: {broom},
{visreg}, {ggplot2}
Thursday 24th – Classes from 09:30 to 17:30
Mixed effects models in theory and practice; visualising fixed and random
effects.
Packages: {lme4}, {broom}, {ggplot2}, {sjPlot}
Friday 25th – Classes from 09:30 to 16:00
Fitting nonlinear functions (polynomial & mechanistic models); brief
introduction to more advanced topics & combining methods (e.g., generalised
linear mixed effects, nonlinear mixed effects, and zero-inflated and
zero-altered models). Packages: {nlsTools}
Email oliverhooker using prstatistics.com
Check out our sister sites,www.PRstatistics.com (Ecology and Life Sciences)
www.PRinformatics.com (Bioinformatics and data science)www.PSstatistics.com
(Behaviour and cognition)
1. November 26th – 30th 2018FUNCTIONAL ECOLOGY FROM ORGANISM TO
ECOSYSTEM: THEORY AND COMPUTATION (FEER01)Glasgow, Scotland, Dr. Francesco
de Bello, Dr. Lars Götzenberger, Dr. Carlos Carmona
http://www.prstatistics.com/course/functional-ecology-from-organism-to-ecosystem-theory-and-computation-feer01/
2. December 3rd – 7th 2018INTRODUCTION TO BAYESIAN DATA ANALYSIS FOR
SOCIAL AND BEHAVIOURAL SCIENCES USING R AND STAN (BDRS01)Glasgow, Dr. Mark
Andrews
https://www.psstatistics.com/course/introduction-to-bayesian-data-analysis-for-social-and-behavioural-sciences-using-r-and-stan-bdrs01/
3. January 21st – 25th 2019STATISTICAL MODELLING OF TIME-TO-EVENT
DATA USING SURVIVAL ANALYSIS: AN INTRODUCTION FOR ANIMAL BEHAVIOURISTS,
ECOLOGISTS AND EVOLUTIONARY BIOLOGISTS (TTED01)Glasgow, Scotland, Dr. Will
Hoppitt
https://www.psstatistics.com/course/statistical-modelling-of-time-to-event-data-using-survival-analysis-tted01/
4. January 21st – 25th 2019ADVANCING IN STATISTICAL MODELLING USING
R (ADVR08)Glasgow, Scotland, Dr. Luc Bussiere, Dr. Tom Houslay
http://www.prstatistics.com/course/advancing-statistical-modelling-using-r-advr08/
5. January 28th– February 1st 2019AQUATIC ACOUSTIC TELEMETRY DATA
ANALYSIS AND SURVEY DESIGNGlasgow, Scotland, VEMCO staff and affiliates
https://www.prstatistics.com/course/aquatic-acoustic-telemetry-data-analysis-atda01/
6. February 4th – 8th 2019DESIGNING RELIABLE AND EFFICIENT
EXPERIMENTS FOR SOCIAL SCIENCES (DRES01) Glasgow, Scotland, Dr. Daniel
Lakens
https://www.psstatistics.com/course/designing-reliable-and-effecient-experiments-for-social-sciences-dres01/
7. February 11th – 15th 2019REPRODUCIBLE DATA SCIENCE FOR POPULATION
GENETICSGlasgow, Scotland, Dr. Thibaut Jombart, Dr. Zhain Kamvar
https://www.prstatistics.com/course/reproducible-data-science-for-population-genetics-rdpg02/
8. 25th February – 1st March 2019MOVEMENT ECOLOGY (MOVE02)Margam
Discovery Centre, Wales, Dr. Luca Borger, Prof. Ronny Wilson, Dr Jonathan
Pottshttps://www.prstatistics.com/course/movement-ecology-move02/ 9.
March 4th – 8th 2019BIOACOUSTICS FOR ECOLOGISTS: HARDWARE, SURVEY DESIGN
AND DATA ANALYSIS (BIAC01)Glasgow, Scotland, Dr. Paul Howden-Leach
https://www.prstatistics.com/course/bioacoustics-for-ecologists-hardware-survey-design-and-data-analysis-biac01/
10. March 11th – 15th 2019ECOLOGICAL NICHE MODELLING USING R
(ENMR03)Glasgow,
Scotland, Dr. Neftali Sillero
http://www.prstatistics.com/course/ecological-niche-modelling-using-r-enmr03/
11. March 18th – 22nd 2019INTRODUCTION TO STATISTICS AND R FOR EVERYONE
(IRFE01)Crete, GREECE, Dr Aristides (Aris) Moustakas
https://www.prstatistics.com/course/introduction-to-statistics-and-r-for-anyone-irfe01/
12. March 25th – 29th 2019LANDSCAPE GENETIC DATA ANALYSIS USING R
(LNDG03)Glasgow, Scotland, Prof. Rodney Dyer
http://www.prstatistics.com/course/landscape-genetic-data-analysis-using-r-lndg03/
13. April 1st – 5th 2019INTRODUCTION TO STATISTICAL MODELLING FOR
PSYCHOLOGISTS USING R (IPSY01)Glasgow, Scotland, Dr. Dale Barr, Dr Luc
Bussierre
http://www.psstatistics.com/course/introduction-to-statistics-using-r-for-psychologists-ipsy02/
14. April 1st – 5th 2019INDIVIDUAL BASED MODELS FOR ECOLOGSITS
(IBME01)Glasgow,
Scotland, Dr Aristides (Aris) Moustakas
https://www.prstatistics.com/course/individual-based-models-using-r-and-netlogo-ibms01/
15. April 8th – 12th 2019MACHINE LEARNING (MLUR01)Glasgow, Scotland, Dr
Aristides (Aris) Moustakas
https://www.prstatistics.com/course/machine-learning-using-r-mlur01/ 16.
April 15th – 19th 2019INTRODUCTION TO Q GIS FOR ECOLOGISTS (QGSE01)Glasgow,
Scotland, Dr Luca Nelli
https://www.prstatistics.com/course/introduction-to-qgis-for-ecologists-qgse01/
17. April 22nd – 26th 2019GIS USING R (GISR)Glasgow, Scotland, Dr Luca
Nellihttps://www.prstatistics.com/course/gis-using-r-gisr01/ 18. April
29th – May 3rd 2019COMPARATIVE GENOMICS (CMGN01)Glasgow, Scotland, Dr.
Fritz Sedlazeck, Dr. Matthias Weissensteiner
https://www.prinformatics.com/course/comparative-genomics-cmgn01/ 19. May
6th – 10th 2019 INTRODUCTION TO MULTILEVEL MODELS (MIXED/HIERARCHICAL) FOR
PSYCHOLOGISTSMyuna Bay, AUSTRALIA, Dr. Sean MurphyLink to follow 20. May
16th – 18th 2019 (please note this a 3-day course from Thursday to
Saturday)AQUATIC
MOVEMENT ECOLOGY USING R (AMER01) Myuna Bay, AUSTRALIA, Dr. Ross Dwyer, Dr.
Vinay UdyawerLink to follow 21. May 16th – 19th 2019 (please note this a
4-day course from Thursday to Monday)INTRODUCTION TO R FOR EVERYONE
(IRFE02)Myuna
Bay, AUSTRALIA, Dr Aristides (Aris) Moustakas
https://www.prstatistics.com/course/introduction-to-statistics-and-r-for-anyone-irfe02/
22. May 20th – 24th 2019MODEL BASE MULTIVARIATE ANALYSIS OF ABUNDANCE
DATA USING R (MBMV03)Myuna Bay, AUSTRALIA, Prof. David Warton
https://www.prstatistics.com/course/model-based-multivariate-analysis-of-abundance-data-using-r-mbmv03/
23. May 21st – 24th 2019STATISTICAL TOOL BOX FOR ECOLOGISTS (STKE01)Myuna
Bay, AUSTRALIA, Dr Aristides (Aris) Moustakas
https://www.prstatistics.com/course/statistical-toolkit-for-ecologists-stke01/
24. June 10th – 14th 2019STABLE ISOTOPE MIXING MODELS USING SIAR, SIBER
AND MIXSIAR (SIMM04)Glasgow, Scotland, Dr. Andrew Parnell, Dr. Andrew
Jackson
www.prstatistics.com/course/stable-isotope-mixing-models-using-r-simm04/ 25.
June 17th – 21st 2019SPATIAL MODELLING AND ANALYSIS OF ADAPTIVE GENOMIC
VARIATION (SPGN01)Glasgow, Dr. Matt Fitzpatrick
https://www.prstatistics.com/course/spatial-modelling-and-analysis-of-adaptive-genomic-variation-spgn01/
26. June 17th – 21st 2019INTRODUCTION TO PYTHON FOR BIOLOGISTS
(IPYB06)Glasgow,
Scotland, Dr. Martin Jones
http://www.prinformatics.com/course/introduction-to-python-for-biologists-ipyb06/
27. June 24th – 28th 2019ADVANCED PYTHON FOR BIOLOGISTS (APYB03)Glasgow,
Scotland, Dr. Martin Jones
www.prinformatics.com/course/advanced-python-biologists-apyb03/ 28. July
1st – 5th 2019DATA VISUALISATION AND MANIPULATION USING PYTHON (DVMP01)Glasgow,
Scotland, Dr. Martin Jones
http://www.prinformatics.com/course/data-visualisation-and-manipulation-using-python-dvmp01/
29. July 29th – August 2nd 2019INTRODUCTION TO SPATIAL ANALYSIS OF
ECOLOGICAL DATA USING R (ISPE01)Glasgow, Scotland, Dr. Jakub Nowosad
https://www.prstatistics.com/course/introduction-to-spatial-analysis-of-ecological-data-using-r-ispe01/
30. September 16th – 20th 2019R PACKAGE DESIGN AND DEVELOPMENT AND
REPRODUCIBLE DATA SCIENCE FOR BIOLOGISTS (RPKG01)Glasgow, Scotland, Dr.
Cory Merow, Dr. Andy Rominger
https://www.prstatistics.com/course/r-package-design-and-development-and-reproducible-data-science-for-biologists-rpkg01/
31. September 30th – October 4th 2019GEOMETRIC MORPHOMETRICS USING R
(GMMR02)Glasgow, Scotland, Prof. Dean Adams, Prof. Michael Collyer, Dr.
Antigoni Kaliontzopoulou
http://www.prstatistics.com/course/geometric-morphometrics-using-r-gmmr02/
32.
October 7th – 11th 2019CONSERVATION PLANNING USING PRIORITIZR : FROM THEORY
TO PRACTICE (PRTZ01)Crete, GREECE, Dr Richard Schuster and Nina Morell
https://www.prstatistics.com/course/conservation-planning-using-prioritizr-from-theory-to-practice-prtz01/
33. October 21st – 25th 2019A COMPLETE GUIDE TO MIXED MODELS (INCLUDING
TEMPORAL AND SPATIAL AUTOCORRELATION) (MMTS01) Crete, GREECE, Dr Aristides
(Aris) Moustakas
https://www.prstatistics.com/course/a-complete-guide-to-mixed-models-including-temporal-and-spatial-autocorrelation-mmts01/
--
Oliver Hooker PhD.
PR statistics
2018 publications -
Alternative routes to piscivory: Contrasting growth trajectories in brown
trout (Salmo trutta) ecotypes exhibiting contrasting life history
strategies. Ecology of Freshwater Fish.
Phenotypic and resource use partitioning amongst sympatric lacustrine brown
trout, Salmo trutta. Biological Journal of the Linnean Society. DOI
10.1093/biolinnean/bly032
prstatistics.com
facebook.com/prstatistics/
twitter.com/PRstatistics
groups.google.com/d/forum/pr-statistics-post-course-forum
prstatistics.com/organiser/oliver-hooker/
--
Oliver Hooker PhD.
PR statistics
2018 publications -
Alternative routes to piscivory: Contrasting growth trajectories in brown
trout (Salmo trutta) ecotypes exhibiting contrasting life history
strategies. Ecology of Freshwater Fish.
Phenotypic and resource use partitioning amongst sympatric lacustrine brown
trout, Salmo trutta. Biological Journal of the Linnean Society. DOI
10.1093/biolinnean/bly032
prstatistics.com
facebook.com/prstatistics/
twitter.com/PRstatistics
groups.google.com/d/forum/pr-statistics-post-course-forum
prstatistics.com/organiser/oliver-hooker/
6 Hope Park Crescent
Edinburgh
EH8 9NA
+44 (0) 7966500340
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