[R-sig-eco] Package to analyse population time series (trend analysis)

[Peter Solymos]

Manuel,

There are few ecology focused packages besides ARIMA() and the forecast
package, for example:

- popbio (based mostly on the Matrix Population Models by Caswell (2001)
and Quantitative Conservation Biology by Morris and Doak (2002).

- PVAClone, that uses JAGS and is based on Nadeem, K., Lele S. R., 2012.
Likelihood based population viability analysis in the presence of
observation error. Oikos 121, 1656–1664.

I am sure there are other packages as well that I am not aware of...

Cheers,

Peter

--
Péter Sólymos
780-492-8534 | solymos at ualberta.ca | peter.solymos.org
Alberta Biodiversity Monitoring Institute http://www.abmi.ca
Boreal Avian Modelling Project http://www.borealbirds.ca

On Wed, Oct 19, 2016 at 6:47 AM, Manuel Spínola <mspinola10 at gmail.com>
wrote:

> Dear list members,
>
> What is the appropriate package to analyze population time series (trend
> analysis) when you have one count per year.
>
> Best,
>
> Manuel
>
> --
> *Manuel Spínola, Ph.D.*
> Instituto Internacional en Conservación y Manejo de Vida Silvestre
> Universidad Nacional
> Apartado 1350-3000
> Heredia
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> mspinola10 at gmail.com
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> site/lobitoderio/>
> Institutional website: ICOMVIS <http://www.icomvis.una.ac.cr/>
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