[R-sig-eco] Comparing survival curves
Gordon Fox
gfox at usf.edu
Thu Sep 6 14:27:40 CEST 2012
> I'm doing survival analysis comparing 8 populations. I've used the survdiff
function for comparing
> survival curves and the result I obtained says that the survivorship curves
are different (p=1.55e-15).
> Now I want to know if all the curves differ or if there are some of them that
don't. What function should I use
> for doing this comparison? I thought about running the test again with every
possible comparison between
> the populations, but this seems like the long way of doing this.
Hi Adriana,
I don't know an R function that will handle this automatically (though it
wouldn't surprise me if someone out there has done it, as it wouldn't be very
difficult). Some years ago I wrote some SAS code to do what I think you're
asking for; it shouldn't be hard to translate that part of the code into R.
The idea behind it is in my chapter on survival analysis in the
Scheiner & Gurevitch book (Design and analysis of ecological statistics) -- you
want the 2nd edition, not the 1st. If you want the SAS code (and a discussion of
these kinds of statistical tests) it's at
http://www.oup.com/us/companion.websites/9780195131888/chapter13/.
One big issue (discussed in the Appendix at the URL above) is that tests asking
whether survival curves are different can sometimes be confusing -- because it
depends on what you mean by "different" -- for example, some tests give a wrong
answer (or maybe I should say the answer to a different question than most
people probably mean) if two curves cross one another. You can get a lot of
information from visually examining the curves themselves.
Gordon
AdRiAnA HuMaNeS <adrihumanes at ...> writes:
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