[R-sig-eco] Co-correspondence analysis

Gavin Simpson gavin.simpson at ucl.ac.uk
Thu Mar 1 11:50:07 CET 2012


On Wed, 2012-02-29 at 18:44 +0100, Duarte Viana wrote:
> Dear all,
> 
> I want relate two matrices of species presence-absence data,
> preferably in a predictive manner. Is it reasonable to do it by
> co-correspondence analysis using the "coca" function in the
> "cocorresp" package? Some papers seem to use presence-absence data,
> but the help document for this function only refers to abundance data.
> 
> Any insights in this would be greatly appreciated.
> 
> Duarte

As CoCA is based very much on the ideas of weighted averages and
correspondence analysis (CA) and that CA can be used on presence absence
data, yes, presence absence data can be analysed using CoCA.

HTH

G

-- 
%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%
 Dr. Gavin Simpson             [t] +44 (0)20 7679 0522
 ECRC, UCL Geography,          [f] +44 (0)20 7679 0565
 Pearson Building,             [e] gavin.simpsonATNOSPAMucl.ac.uk
 Gower Street, London          [w] http://www.ucl.ac.uk/~ucfagls/
 UK. WC1E 6BT.                 [w] http://www.freshwaters.org.uk
%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%



More information about the R-sig-ecology mailing list