[R-sig-eco] ANOSIM-Beginner
yy.loh at york.ac.uk
yy.loh at york.ac.uk
Wed Nov 9 15:33:18 CET 2011
Hi,
I have a silly question about anosim in R, this is because i couldn't find
the answer in any R Help or yet to find one from google. i.e.: How to
interpret the result from summary(dune.ano) in anosim?
> summary(dune.ano)
Call:
anosim(dat = dune.dist, grouping = Management)
Dissimilarity: bray
ANOSIM statistic R: 0.2579
Significance: 0.016 <---May i know the null hypothesis for test?
Based on 999 permutations
Empirical upper confidence limits of R:
90% 95% 97.5% 99%
0.112 0.166 0.200 0.281
Dissimilarity ranks between and within classes:
0% 25% 50% 75% 100% N <---The implications from this table. Between
4 58.50 104.00 145.500 188.0 147 BF 5 15.25 25.50 41.250 57.0 3 HF 1 7.25
46.25 68.125 89.5 10 NM 6 64.75 124.50 156.250 181.0 15 SF 3 32.75 53.50
99.250 184.0 15
Thanking you guys in advance.
Sincerely Yours,
J
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