[R-sig-eco] Sites names with spaces in ordiplot
Gavin Simpson
gavin.simpson at ucl.ac.uk
Fri Apr 1 01:55:25 CEST 2011
On Fri, 2011-04-01 at 00:46 +0100, Gavin Simpson wrote:
> On Thu, 2011-03-31 at 14:18 -0600, Manuel Spínola wrote:
> > Dear list members,
> >
> > I would like to include sites names with blank spaces in an ordiplot for
> > an nmds (in vegan).
> > How I do that?
>
> Did you even try it? It works - we and R don't give two hoots what the
> labels are, just make sure the row and col names of the dataframe/matrix
> are what you want to appear on the plot.
OK, the usual constraints on row and column names for matrices and data
frames apply, but other than that, we and R don't give two hoots.
G
> Here is an (not exactly inspiring) example:
>
> require(vegan)
> set.seed(1)
> dat <- data.frame(matrix(runif(100), ncol = 10))
> names(dat) <- paste("Spp", 1:10, sep = "")
> rownames(dat) <- paste("Site", 1:10)
>
> head(dat)
>
> mod <- metaMDS(dat)
> plot(mod, type = "text")
>
> HTH
>
> G
>
> > Best,
> >
> > Manuel
> >
> >
> > _______________________________________________
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> > R-sig-ecology at r-project.org
> > https://stat.ethz.ch/mailman/listinfo/r-sig-ecology
>
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Dr. Gavin Simpson [t] +44 (0)20 7679 0522
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