[R-sig-eco] Interpreting large clusters

Phil Novack-Gottshall pnovackg at westga.edu
Tue Oct 14 12:46:11 CEST 2008


Hi all,

I have a related question concerning cluster analysis of large data 
sets.  In my case, the matrix is reasonably small for R to work with, 
but I have so many species (~2000) that it is not possible to read 
labels on the resulting dendrogram.  I imagine that using an 
ordination is a preferable method in this case, but I was wondering 
whether anyone had any recommendations for producing a very large, 
but still readable dendrogram.  (I've tried increasing the window 
size and shrinking cex.text, but this still isn't sufficient.)

Cheers,
Phil


~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   Phil 
Novack-Gottshall                        pnovackg at westga.edu 


   Assistant Professor
   Department of Geosciences
   University of West Georgia
   Carrollton, GA 30118-3100
   Phone: 678-839-4061
   Fax: 678-839-4071
   http://www.westga.edu/~pnovackg
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~



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