[R-sig-dyn-mod] lsode vs ode15s; ok with radau
Faelens Ruben
ruben.faelens at altran.com
Mon Jan 2 13:45:09 CET 2012
> [...]Unfortunately, there is still a significant computational
difference:
>
> ode15s: 35s
> radau: 1333s
> [...]
Please see
http://www.bioconductor.org/help/course-materials/2010/BioC2010/Efficien
tRProgramming.pdf for hints on efficient R programming. My model sped up
by a factor 5 by removing names from matrices and carefully looking at
which objects were duplicated.
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