[R-sig-Debian] updating R packages with r2u
ravi
rv15| @end|ng |rom y@hoo@@e
Sat Nov 15 21:37:47 CET 2025
Hi Dirk,Really sorry for my mangling up the text format. Will try to take special care of this in future posts.
I am now enclosing a text file separately with the same text. Have not used the github repo before. Will give it a try to learn about that as well. You can choose which forum you want to reply.Cheers, Ravi
On Saturday 15 November 2025 at 15:38:14 CET, Dirk Eddelbuettel <edd using debian.org> wrote:
Hi Ravi,
Can you try sending this again, preferably as a text (not html) email with a
little bit more attention played to formatting? Empty lines between
paragraphs help. It is currently near impossible to read this.
If it is solely a r2u matter you could also open an issue at its github repo,
issues allow you to format in markdown and formated included output verbatim.
Many thanks, Dirk
On 15 November 2025 at 14:13, ravi via R-SIG-Debian wrote:
| Hi,I am grateful for the help that I received in setting up r2u on my ubuntu system a while back. This is working fine. But I have some strange problem with r2u on another PC that, as far as I know, I installed in the the same way.
| Let me first show the results in Rstudio from the successfully working Ubuntu system:
| install.packages(c("broom", "curl", "data.table", "dbplyr", "dtplyr", "evaluate", "forcats", "gargle", "ggplot2", "googledrive", "googlesheets4", "haven", "hms", "igraph", "magrittr", "openssl", "pillar", "pracma", "purrr", "Radviz", "ragg", "Rcpp", "RcppArmadillo", "reformulas", "renv", "rmarkdown", "rvest", "stringr", "systemfonts", "textshaping", "tibble", "utf8", "vroom", "xfun", "xml2"))Install system packages...Reading package lists... DoneBuilding dependency tree... DoneReading state information... DoneHit https://cloud.r-project.org/bin/linux/ubuntu noble-cran40/ InReleaseHit http://archive.ubuntu.com/ubuntu noble InReleaseHit https://r2u.stat.illinois.edu/ubuntu noble InReleaseFetched 0 B in 0s (0 B/s)Reading package lists... DoneBuilding dependency tree... DoneReading state information... DoneGet:1 https://r2u.stat.illinois.edu/ubuntu noble/main amd64 r-cran-rbibutils amd64 2.3-1.ca2404.2 [940 kB]Get:2 https://r2u.stat.illinois.edu/ubuntu noble/main all r-cran-rdpack all 2.
| 6.4-1.ca2404.1 [623 kB]Get:3 https://r2u.stat.illinois.edu/ubuntu noble/main all r-cran-reformulas all 0.4.2-1.ca2404.1 [132 kB]Fetched 1696 kB in 0s (0 B/s)
| Now, I will show the results from the Ubuntu system that appears to work OK, but does not download anything:install.packages(c("broom", "forcats", "hms", "magrittr", "openssl", "pillar", "rmarkdown", "vroom"))Install system packages...Reading package lists... DoneBuilding dependency tree... DoneReading state information... DoneHit https://cloud.r-project.org/bin/linux/ubuntu noble-cran40/ InReleaseHit http://security.ubuntu.com/ubuntu noble-security InReleaseHit http://archive.ubuntu.com/ubuntu noble InReleaseHit http://archive.ubuntu.com/ubuntu noble-updates InReleaseHit http://archive.ubuntu.com/ubuntu noble-backports InReleaseHit https://r2u.stat.illinois.edu/ubuntu noble InReleaseFetched 0 B in 0s (0 B/s)Reading package lists... DoneBuilding dependency tree... DoneReading state information... DoneFetched 0 B in 0s (0 B/s)
| "Fetched 0 B" ? What can be the reason? The only differences that I can see from the two versions are the following two lines in the latter:Hit http://security.ubuntu.com/ubuntu noble-security InRelease
| Hit http://archive.ubuntu.com/ubuntu noble-backports InRelease
|
| The .libPaths for the latter are :> .libPaths()[1] "/home/ravi/R/x86_64-pc-linux-gnu-library/4.5" "/usr/local/lib/R/site-library" "/usr/lib/R/site-library"[4] "/usr/lib/R/library"
| I don't have a problem with updating and installing ubuntu for the latter. The problem appears to only with r2u.
| Is this a known problem? Please let me know if any additional information is needed for troubleshooting.Thanks.Ravi
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--
dirk.eddelbuettel.com | @eddelbuettel | edd using debian.org
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