[R-sig-Debian] Cannot install packages

[Ernes Cereku]

Hi,

Every package I try to install in R i get the same error "had non zero-exit
status".

I use Ubuntu 18.04.1 LTS

how can i fix this? Thank you

This shows up when I try install.packages("Rcmdr", dep=T)

Error : package ‘htmltools’ was installed by an R version with different
internals; it needs to be reinstalled for use with this R version
ERROR: lazy loading failed for package ‘rmarkdown’
* removing ‘/home/ernes/R/x86_64-pc-linux-gnu-library/3.5/rmarkdown’
ERROR: dependency ‘shiny’ is not available for package ‘miniUI’
* removing ‘/home/ernes/R/x86_64-pc-linux-gnu-library/3.5/miniUI’
ERROR: dependency ‘shiny’ is not available for package ‘crosstalk’
* removing ‘/home/ernes/R/x86_64-pc-linux-gnu-library/3.5/crosstalk’
ERROR: dependency ‘arm’ is not available for package ‘mi’
* removing ‘/home/ernes/R/x86_64-pc-linux-gnu-library/3.5/mi’
ERROR: dependency ‘rio’ is not available for package ‘car’
* removing ‘/home/ernes/R/x86_64-pc-linux-gnu-library/3.5/car’
ERROR: dependencies ‘shiny’, ‘miniUI’ are not available for package
‘manipulateWidget’
* removing ‘/home/ernes/R/x86_64-pc-linux-gnu-library/3.5/manipulateWidget’
ERROR: dependency ‘car’ is not available for package ‘RcmdrMisc’
* removing ‘/home/ernes/R/x86_64-pc-linux-gnu-library/3.5/RcmdrMisc’
ERROR: dependency ‘mi’ is not available for package ‘sem’
* removing ‘/home/ernes/R/x86_64-pc-linux-gnu-library/3.5/sem’
ERROR: dependencies ‘shiny’, ‘crosstalk’, ‘manipulateWidget’ are not
available for package ‘rgl’
* removing ‘/home/ernes/R/x86_64-pc-linux-gnu-library/3.5/rgl’
ERROR: dependencies ‘RcmdrMisc’, ‘car’ are not available for package ‘Rcmdr’
* removing ‘/home/ernes/R/x86_64-pc-linux-gnu-library/3.5/Rcmdr’

The downloaded source packages are in
    ‘/tmp/Rtmp96RN5M/downloaded_packages’
There were 14 warnings (use warnings() to see them)

--And this show up when I try just install.packages()

* installing *source* package ‘rio’ ...
** package ‘rio’ successfully unpacked and MD5 sums checked
** R
** inst
** byte-compile and prepare package for lazy loading
Error : package ‘data.table’ was installed by an R version with different
internals; it needs to be reinstalled for use with this R version
ERROR: lazy loading failed for package ‘rio’
* removing ‘/home/ernes/R/x86_64-pc-linux-gnu-library/3.5/rio’
* installing *source* package ‘effects’ ...
** package ‘effects’ successfully unpacked and MD5 sums checked
** R
** inst
** byte-compile and prepare package for lazy loading
Error : package ‘colorspace’ was installed by an R version with different
internals; it needs to be reinstalled for use with this R version
ERROR: lazy loading failed for package ‘effects’
* removing ‘/home/ernes/R/x86_64-pc-linux-gnu-library/3.5/effects’
ERROR: dependency ‘rio’ is not available for package ‘car’
* removing ‘/home/ernes/R/x86_64-pc-linux-gnu-library/3.5/car’
ERROR: dependency ‘car’ is not available for package ‘RcmdrMisc’
* removing ‘/home/ernes/R/x86_64-pc-linux-gnu-library/3.5/RcmdrMisc’
ERROR: dependencies ‘RcmdrMisc’, ‘car’ are not available for package ‘Rcmdr’
* removing ‘/home/ernes/R/x86_64-pc-linux-gnu-library/3.5/Rcmdr’

The downloaded source packages are in
    ‘/tmp/Rtmp96RN5M/downloaded_packages’
Warning messages:
1: In install.packages("Rcmdr") :
  installation of package ‘rio’ had non-zero exit status
2: In install.packages("Rcmdr") :
  installation of package ‘effects’ had non-zero exit status
3: In install.packages("Rcmdr") :
  installation of package ‘car’ had non-zero exit status
4: In install.packages("Rcmdr") :
  installation of package ‘RcmdrMisc’ had non-zero exit status
5: In install.packages("Rcmdr") :
  installation of package ‘Rcmdr’ had non-zero exit status

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