[R-sig-Debian] Problems installing tibble (ggplot2) in R running Ubuntu 14.04
Terje Jørgensen
terjej at imr.no
Mon Dec 19 14:27:53 CET 2016
Hi,
I am unable to install tibble, a required package for ggplot2 in R. I am
running R (version 3.3.2 ) in RStudio (version 1.0.44). My OS is ubuntu
14.04 (64 bits).
I get the same error when running R from the terminal.
Any help would be gretly appreciated.
Kind regards,
Terje
****************
Error messages:
****************
install.packages("tibble")
Installing package into ‘/home/terjej/R/x86_64-pc-linux-gnu-library/3.3’
(as ‘lib’ is unspecified)
trying URL 'https://cran.rstudio.com/src/contrib/tibble_1.2.tar.gz'
Content type 'unknown' length 54517 bytes (53 KB)
==================================================
downloaded 53 KB
* installing *source* package ‘tibble’ ...
** package ‘tibble’ successfully unpacked and MD5 sums checked
** libs
g++ -I/usr/share/R/include -DNDEBUG
-I"/usr/lib/R/site-library/Rcpp/include" -fpic -g -O2
-fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c RcppExports.cpp -o
RcppExports.o
g++ -I/usr/share/R/include -DNDEBUG
-I"/usr/lib/R/site-library/Rcpp/include" -fpic -g -O2
-fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c matrixToDataFrame.cpp
-o matrixToDataFrame.o
matrixToDataFrame.cpp: In function ‘Rcpp::CharacterVector
get_names(const Rcpp::Matrix<RTYPE>&, int)’:
matrixToDataFrame.cpp:58:16: error: ‘tfm’ has not been declared
names[i] = tfm::format( "V%d", (i+1) ) ;
^
matrixToDataFrame.cpp: In instantiation of ‘Rcpp::List
copy_columns(const Rcpp::Matrix<RTYPE>&) [with int RTYPE = 10;
Rcpp::List = Rcpp::Vector<19>]’:
matrixToDataFrame.cpp:91:48: required from here
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<10>’
typename Matrix<RTYPE>::ConstColumn column( m.column(j) ) ;
^
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<10>’
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<10>’
matrixToDataFrame.cpp: In instantiation of ‘Rcpp::List
copy_columns(const Rcpp::Matrix<RTYPE>&) [with int RTYPE = 13;
Rcpp::List = Rcpp::Vector<19>]’:
matrixToDataFrame.cpp:92:48: required from here
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<13>’
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<13>’
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<13>’
matrixToDataFrame.cpp: In instantiation of ‘Rcpp::List
copy_columns(const Rcpp::Matrix<RTYPE>&) [with int RTYPE = 14;
Rcpp::List = Rcpp::Vector<19>]’:
matrixToDataFrame.cpp:93:49: required from here
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<14>’
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<14>’
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<14>’
matrixToDataFrame.cpp: In instantiation of ‘Rcpp::List
copy_columns(const Rcpp::Matrix<RTYPE>&) [with int RTYPE = 15;
Rcpp::List = Rcpp::Vector<19>]’:
matrixToDataFrame.cpp:94:49: required from here
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<15>’
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<15>’
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<15>’
matrixToDataFrame.cpp: In instantiation of ‘Rcpp::List
copy_columns(const Rcpp::Matrix<RTYPE>&) [with int RTYPE = 16;
Rcpp::List = Rcpp::Vector<19>]’:
matrixToDataFrame.cpp:95:48: required from here
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<16>’
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<16>’
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<16>’
matrixToDataFrame.cpp: In instantiation of ‘Rcpp::List
copy_columns(const Rcpp::Matrix<RTYPE>&) [with int RTYPE = 19;
Rcpp::List = Rcpp::Vector<19>]’:
matrixToDataFrame.cpp:96:48: required from here
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<19>’
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<19>’
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<19>’
make: *** [matrixToDataFrame.o] Error 1
ERROR: compilation failed for package ‘tibble’
* removing ‘/home/terjej/R/x86_64-pc-linux-gnu-library/3.3/tibble’
Warning in install.packages :
installation of package ‘tibble’ had non-zero exit status
The downloaded source packages are in
‘/tmp/RtmpxDCEIv/downloaded_packages’
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