[R-sig-DB] Segmentation faults using RSQLite

Richard Bourgon bourgon @end|ng |rom eb|@@c@uk
Tue Nov 7 13:32:57 CET 2006


Seth,

The updated version runs without errors. Thanks for the quick repair!

- Richard

On 7 Nov 2006, at 07:12, Seth Falcon wrote:

>> Richard Bourgon <bourgon using ebi.ac.uk> writes:
>>> My application requires a single table of doubles with 225 columns
>>> and about 6M rows. The following session transcript mimics this
>>> table, and consistently produces errors: sometimes an immediate seg
>>> fault, and sometimes one of several odd but non-critical error
>>> messages, an example of which appears below. (In the latter case, if
>>> I try to rerun the bit that generated the error, then I usually get
>>> the seg fault.)
>
> I believe that I've found and fixed the bug causing the segfault you
> reported.
>
> I've posted an updated version, RSQLite 0.4-13, here:
>
> http://www.bioconductor.org/packages/misc/
>
> Could you give it a try and confirm that it works for you?
>
> Thanks again for the bug report.
>
> Best,
>
> + seth




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