[R-pkg-devel] CRAN check servers terminating on stanExports_*.o files

[Ivan Krylov]

В Sat, 15 Jun 2024 15:11:36 +0000
"Slager, Dave" <dslager using fredhutch.org> пишет:

> The r-patched-linux-x86_64 and/or r-release-linux-x86_64 CRAN check
> servers seem to be erroring out on multiple packages, including
> these, for similar reasons:
> 
> bakR
> baldur
> bayes4psy
> BayesGmed
> ctsem
> eggCounts
> FlexReg
> networkscaleup
> ssMousetrack
> thurstonianIRT
> trialr

I've experimented with BayesGmed a bit (because it has less
dependencies than other packages in the list). Most of its object files
require the C++ compiler to allocate more than three gigabytes of
memory. Additionally, ctsem has a slightly different error:

>> g++-13: fatal error: Killed signal terminated program cc1plus
>> compilation terminated.
>> make[1]: ***
>> [/home/hornik/tmp/R.check/r-release-gcc/Work/build/etc/Makeconf:200:
>> stanExports_ctsm.o] Error 1

This is evidence of the computer running out of memory and killing the
processes that the kernel deems responsible.

How much memory should it normally take to install a package that makes
use of rstan?

-- 
Best regards,
Ivan