[R-pkg-devel] CRAN submission with warnings

[Duncan Murdoch]

On 26/07/2021 4:43 p.m., Kent Johnson wrote:
> The {anytime} package by Dirk Eddelbuettel uses {BH} and generates the 
> same NOTE when I CMD Check it locally on Windows. It seems safe to 
> ignore this NOTE.

But it generates no messages on CRAN:  OK all the way.

Duncan Murdoch

> 
> Kent
> 
> ------------------------------------------------------------------------
> *From:* Duncan Murdoch <murdoch.duncan using gmail.com>
> If you look at the BH page on CRAN, there are a ton of "reverse linking
> to" packages, i.e. packages that are doing something like what you do.
> It would be worth looking at a few of those that don't generate those
> warnings (e.g. abcADM, ACEt, etc.) to see if they're using the same
> parts of Boost as you're using, and have found a way to avoid the warnings.
> 
> Duncan Murdoch
> 
>  >
>  > Kent
>  >
>  > ------------------------------------------------------------------------
>  > *From:* Duncan Murdoch <murdoch.duncan using gmail.com>
> 
>  > The second issue you mention in your comment looks more serious:
>  > "Found 'abort', possibly from 'abort' (C), 'runtime' (Fortran) Found
>  > 'exit', possibly from 'exit' (C), 'stop' (Fortran) Found 'printf',
>  > possibly from 'printf' (C)".
>  >
>  > Your response that you don't call 'abort', 'exit' or 'printf' isn't
>  > sufficient here: those functions appear to have been linked in to your
>  > DLL, so somebody is calling them. I'd try to track down those calls and
>  > see if there's a way to compile without them.
>  >
>  > Duncan Murdoch
>  >
>  > >
>  > > win-builder results are here:
>  > 
> https://win-builder.r-project.org/incoming_pretest/rtree_0.2.0_20210721_153225/Windows/00check.log 
> <https://win-builder.r-project.org/incoming_pretest/rtree_0.2.0_20210721_153225/Windows/00check.log> 
> 
>  > 
> <https://win-builder.r-project.org/incoming_pretest/rtree_0.2.0_20210721_153225/Windows/00check.log 
> <https://win-builder.r-project.org/incoming_pretest/rtree_0.2.0_20210721_153225/Windows/00check.log>>
>  > > cran-comments.md here:
>  > https://github.com/akoyabio/rtree/blob/master/cran-comments.md 
> <https://github.com/akoyabio/rtree/blob/master/cran-comments.md>
>  > <https://github.com/akoyabio/rtree/blob/master/cran-comments.md 
> <https://github.com/akoyabio/rtree/blob/master/cran-comments.md>>
>  > >
>  > > Thank you for any guidance,
>  > > Kent Johnson
>  > > Akoya Biosciences
>  > >
>  > > [[alternative HTML version deleted]]
>  > >
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