[R-pkg-devel] CRAN submission with warnings
Duncan Murdoch
murdoch@dunc@n @end|ng |rom gm@||@com
Mon Jul 26 23:55:56 CEST 2021
On 26/07/2021 4:43 p.m., Kent Johnson wrote:
> The {anytime} package by Dirk Eddelbuettel uses {BH} and generates the
> same NOTE when I CMD Check it locally on Windows. It seems safe to
> ignore this NOTE.
But it generates no messages on CRAN: OK all the way.
Duncan Murdoch
>
> Kent
>
> ------------------------------------------------------------------------
> *From:* Duncan Murdoch <murdoch.duncan using gmail.com>
> If you look at the BH page on CRAN, there are a ton of "reverse linking
> to" packages, i.e. packages that are doing something like what you do.
> It would be worth looking at a few of those that don't generate those
> warnings (e.g. abcADM, ACEt, etc.) to see if they're using the same
> parts of Boost as you're using, and have found a way to avoid the warnings.
>
> Duncan Murdoch
>
> >
> > Kent
> >
> > ------------------------------------------------------------------------
> > *From:* Duncan Murdoch <murdoch.duncan using gmail.com>
>
> > The second issue you mention in your comment looks more serious:
> > "Found 'abort', possibly from 'abort' (C), 'runtime' (Fortran) Found
> > 'exit', possibly from 'exit' (C), 'stop' (Fortran) Found 'printf',
> > possibly from 'printf' (C)".
> >
> > Your response that you don't call 'abort', 'exit' or 'printf' isn't
> > sufficient here: those functions appear to have been linked in to your
> > DLL, so somebody is calling them. I'd try to track down those calls and
> > see if there's a way to compile without them.
> >
> > Duncan Murdoch
> >
> > >
> > > win-builder results are here:
> >
> https://win-builder.r-project.org/incoming_pretest/rtree_0.2.0_20210721_153225/Windows/00check.log
> <https://win-builder.r-project.org/incoming_pretest/rtree_0.2.0_20210721_153225/Windows/00check.log>
>
> >
> <https://win-builder.r-project.org/incoming_pretest/rtree_0.2.0_20210721_153225/Windows/00check.log
> <https://win-builder.r-project.org/incoming_pretest/rtree_0.2.0_20210721_153225/Windows/00check.log>>
> > > cran-comments.md here:
> > https://github.com/akoyabio/rtree/blob/master/cran-comments.md
> <https://github.com/akoyabio/rtree/blob/master/cran-comments.md>
> > <https://github.com/akoyabio/rtree/blob/master/cran-comments.md
> <https://github.com/akoyabio/rtree/blob/master/cran-comments.md>>
> > >
> > > Thank you for any guidance,
> > > Kent Johnson
> > > Akoya Biosciences
> > >
> > > [[alternative HTML version deleted]]
> > >
> > > ______________________________________________
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> > >
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