[R-pkg-devel] R package depends on Bioconductor packages RTIGER

[Uwe Ligges]

Reason is that BioC 3.13 does not offer a new rtracklayer binary which 
the winbuilder machine typically uses.
As this also does not install from sources for me. So this seems hard to 
set up.


Best,
Uwe Ligges








On 07.04.2021 12:18, Rafael CM wrote:
> Dear all,
> I am trying to submit a package to CRAN that depends on Bioconductor
> packages. On debian, I do not have any problems so far. But when checking
> for windows I get several errors:
> 
> Error: package or namespace load failed for 'Gviz' in loadNamespace(j
> <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
>   namespace 'rtracklayer' 1.48.0 is already loaded, but >= 1.51.5 is required
> Error: package 'Gviz' could not be loaded
> In addition: Warning message:
> multiple methods tables found for 'export'
> Execution halted
> ERROR: lazy loading failed for package 'RTIGER'
> * removing 'd:/RCompile/CRANincoming/R-devel/lib/RTIGER'
> * restoring previous 'd:/RCompile/CRANincoming/R-devel/lib/RTIGER'
> 
> Could someone help me?
> 
> Thank you very much,
> 
> Rafael
> 
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