[R-pkg-devel] Help Debugging Debian Error

[Gábor Csárdi]

It is unlikely that this is an R-hub issue because the first link is
CRAN's machine, and the same error happens there.

I can reproduce it on macOS:

git clone https://github.com/paulhibbing/PAutilities
R CMD INSTALL PAutilities

R -q -e 'packageDescription("PAutilities")$Built'
#> > packageDescription("PAutilities")$Built
#> [1] "R 3.6.2; x86_64-apple-darwin15.6.0; 2020-05-15 01:24:03 UTC; unix"

R -q -e "library(PAutilities)"
#> > library(PAutilities)
#> package 'PAutilities' was built under R version 3.5.0

I have no clue how this can happen, I clearly just built it on R 3.6.3

Gabor

On Fri, May 15, 2020 at 2:08 AM Dirk Eddelbuettel <edd using debian.org> wrote:
>
> On 14 May 2020 at 11:41, Paul Hibbing wrote:
> | * Here is the CRAN check (devel version 2020-05-13):
> |
> | https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-debian-gcc/PAutilities-00check.html
> |
> | * Here is the successful R-hub check (devel version 2020-05-10):
> |
> | https://artifacts.r-hub.io/PAutilities_1.0.0.tar.gz-43f919fd5595416799d74bfb312fdd34/PAutilities.Rcheck/00check.log
> |
> | * Here is the unsuccessful R-hub check (R 3.6.3)
> |
> | https://artifacts.r-hub.io/PAutilities_1.0.0.tar.gz-c1592e94abe04155933d5dfe5898c1b8/PAutilities.Rcheck/00check.log
>
> Hm, doesn't that simply mean that this r-hub box is out of sync?
>
> So maybe file an issue at the rhub github repo, and test with another of the
> (many!)  available platforms at rhub -- run rhub::platforms() to see.
>
> Dirk
>
> | On Thu, May 14, 2020 at 11:36 AM Paul Hibbing <paulhibbing using gmail.com> wrote:
> | >
> | > Hi all,
> | >
> | > At some point (I believe within the last week or so), my package
> | > `PAutilities` has developed the following error for
> | > r-devel-linux-x86_64-debian-gcc:
> | >
> | > * checking tests ... [3s/3s] ERROR
> | >   Running ‘testthat.R’ [3s/3s]
> | > Running the tests in ‘tests/testthat.R’ failed.
> | > Complete output:
> | >   > library(testthat)
> | >   > library(PAutilities)
> | >   package 'PAutilities' was built under R version 3.5.0
> | >   >
> | >   > test_check("PAutilities")
> | >
> | > I get the same error using `rhub::check_on_debian`, but not
> | > `rhub::check(platform = "debian-gcc-devel")`.
> | >
> | > So far, my best guesses have been that issues were caused by either a
> | > dependency problem (particularly the `matchingMarkets` package, which
> | > has given me trouble in the past), or with the major increment in R
> | > itself. But so far neither of those ideas have yielded much fruit. Any
> | > other ideas, considerations, or things I should be aware of? I'm
> | > working on installing a virtual machine to see about some manual
> | > debugging, but I would love some guidance in the meantime.
> | >
> | > Best,
> | > Paul Hibbing
> |
> | ______________________________________________
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> | https://stat.ethz.ch/mailman/listinfo/r-package-devel
>
> --
> http://dirk.eddelbuettel.com | @eddelbuettel | edd using debian.org
>
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