[R-pkg-devel] R CMD check fails on namespace load for an installed package
Paul Bailey
p@u|@de@n@b@||ey @end|ng |rom gm@||@com
Sat Apr 11 00:23:59 CEST 2020
When I try to R CMD check --as-cran the EdSurvey package for submission on R-devel I get this error:
>
> * installing *source* package 'EdSurvey' ...
> ** using staged installation
> ** R
> ** inst
> ** byte-compile and prepare package for lazy loading
> Error: package or namespace load failed for 'car':
> package 'car' was installed before R 4.0.0: please re-install it
> Error: package 'car' could not be loaded
> Execution halted
> ERROR: lazy loading failed for package 'EdSurvey'
> * removing 'C:/Users/pbailey/Documents/GitHub/EdSurvey.Rcheck/EdSurvey'
>
So, I went into R and tried installing car, and that appears to exit cleanly (at end of message). But then I still got the same (above) message.
I made sure the .libPath was the one in R-devel/library.
What can I do to test my package on R-devel?
>
> > install.packages("car")
> Warning: unable to access index for repository https://cloud.r-project.org/bin/windows/contrib/4.1: <https://cloud.r-project.org/bin/windows/contrib/4.1:>
> cannot open URL 'https://cloud.r-project.org/bin/windows/contrib/4.1/PACKAGES <https://cloud.r-project.org/bin/windows/contrib/4.1/PACKAGES>'
> installing the source package ‘car’
>
> trying URL 'https://cloud.r-project.org/src/contrib/car_3.0-7.tar.gz <https://cloud.r-project.org/src/contrib/car_3.0-7.tar.gz>'
> Content type 'application/x-gzip' length 497735 bytes (486 KB)
> downloaded 486 KB
>
> * installing *source* package 'car' ...
> ** package 'car' successfully unpacked and MD5 sums checked
> ** using staged installation
> ** R
> ** inst
> ** byte-compile and prepare package for lazy loading
> ** help
> *** installing help indices
> converting help for package 'car'
> finding HTML links ... done
> Anova html
> Boot html
> Boxplot html
> Contrasts html
> Rd warning: C:/Users/pbailey/AppData/Local/Temp/1/Rtmpisyc8f/R.INSTALL3f14202022a7/car/man/Contrasts.Rd:68: file link 'contr.treatment' in package 'stats' does not exist and so has been treated as a topic
> Rd warning: C:/Users/pbailey/AppData/Local/Temp/1/Rtmpisyc8f/R.INSTALL3f14202022a7/car/man/Contrasts.Rd:68: file link 'contr.sum' in package 'stats' does not exist and so has been treated as a topic
> Rd warning: C:/Users/pbailey/AppData/Local/Temp/1/Rtmpisyc8f/R.INSTALL3f14202022a7/car/man/Contrasts.Rd:69: file link 'contr.helmert' in package 'stats' does not exist and so has been treated as a topic
> Rd warning: C:/Users/pbailey/AppData/Local/Temp/1/Rtmpisyc8f/R.INSTALL3f14202022a7/car/man/Contrasts.Rd:69: file link 'contr.poly' in package 'stats' does not exist and so has been treated as a topic
> Ellipses html
> Export html
> Import html
> Predict html
> S html
> ScatterplotSmoothers html
> Tapply html
> TransformationAxes html
> avPlots html
> bcPower html
> boxCox html
> boxCoxVariable html
> boxTidwell html
> brief html
> car-defunct html
> car-deprecated html
> car-internal html
> carHexsticker html
> carPalette html
> carWeb html
> ceresPlots html
> compareCoefs html
> crPlots html
> deltaMethod html
> densityPlot html
> dfbetaPlots html
> durbinWatsonTest html
> hccm html
> hist.boot html
> infIndexPlot html
> influence-mixed-models html
> influencePlot html
> Rd warning: C:/Users/pbailey/AppData/Local/Temp/1/Rtmpisyc8f/R.INSTALL3f14202022a7/car/man/influencePlot.Rd:57: file link 'cooks.distance' in package 'stats' does not exist and so has been treated as a topic
> Rd warning: C:/Users/pbailey/AppData/Local/Temp/1/Rtmpisyc8f/R.INSTALL3f14202022a7/car/man/influencePlot.Rd:57: file link 'rstudent' in package 'stats' does not exist and so has been treated as a topic
> Rd warning: C:/Users/pbailey/AppData/Local/Temp/1/Rtmpisyc8f/R.INSTALL3f14202022a7/car/man/influencePlot.Rd:58: file link 'hatvalues' in package 'stats' does not exist and so has been treated as a topic
> invResPlot html
> invTranPlot html
> leveneTest html
> leveragePlots html
> linearHypothesis html
> logit html
> marginalModelPlot html
> mcPlots html
> ncvTest html
> outlierTest html
> panel.car html
> poTest html
> powerTransform html
> qqPlot html
> Rd warning: C:/Users/pbailey/AppData/Local/Temp/1/Rtmpisyc8f/R.INSTALL3f14202022a7/car/man/qqPlot.Rd:124: file link 'qqplot' in package 'stats' does not exist and so has been treated as a topic
> Rd warning: C:/Users/pbailey/AppData/Local/Temp/1/Rtmpisyc8f/R.INSTALL3f14202022a7/car/man/qqPlot.Rd:125: file link 'qqline' in package 'stats' does not exist and so has been treated as a topic
> recode html
> regLine html
> residualPlots html
> scatter3d html
> scatterplot html
> finding level-2 HTML links ... done
>
> scatterplotMatrix html
> showLabels html
> sigmaHat html
> some html
> Rd warning: C:/Users/pbailey/AppData/Local/Temp/1/Rtmpisyc8f/R.INSTALL3f14202022a7/car/man/some.Rd:48: file link 'tail' in package 'utils' does not exist and so has been treated as a topic
> spreadLevelPlot html
> subsets html
> symbox html
> testTransform html
> vif html
> wcrossprod html
> which.names html
> ** building package indices
> ** installing vignettes
> ** testing if installed package can be loaded from temporary location
> *** arch - i386
> *** arch - x64
> ** testing if installed package can be loaded from final location
> *** arch - i386
> *** arch - x64
> ** testing if installed package keeps a record of temporary installation path
> * DONE (car)
>
> The downloaded source packages are in
> ‘C:\Users\pbailey\AppData\Local\Temp\1\RtmpWiUQtf\downloaded_packages’
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