Hi,Thanks to your reply and your information. Right now it stays only one note when I've made R-devel CMD CHECK --as-cran. So, I didn't identified this note in repertory R.check. What's file I've to check?I'd like to know if I can new submission in CRAN with one note. Sylvain
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Le jeu., avr. 4, 2019 à 17:09, Maëlle SALMON<maelle.salmon using yahoo.se> a écrit : I'd recommend reading https://r-pkgs.org/description.html#dependencies (and the rest of the book is very good as well), it'll help you understand why and how to declare dependencies.
Den torsdag 4 april 2019 17:05:02 CEST, cartograflow using gmail.com <cartograflow using gmail.com> skrev:
How I can declare the dependencies in DESCRIPTION file?
depends: library(dplyr,dependencies =TRUE)
Thanks
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Le jeu., avr. 4, 2019 à 14:42, Uwe Ligges<ligges using statistik.tu-dortmund.de> a écrit : .... or forgot to declare a dependency on that package in the
DESCRIPTION file...
Best,
Uwe Ligges
On 04.04.2019 13:34, Sebastian Meyer wrote:
> There are probably no clairvoyants around here. So, again, without
> access to the up-to-date source code of your package, nobody will be
> able to help.
>
> "there is no package called ..." means that the given package is not
> installed in any of the libraries currently in use by R (see .libPaths()
> for the relevant paths). Maybe you have installed "dplyr" in a library
> used by your standard R installation, but not in any library used by
> your R-devel installation (which you seem to use for checking the
> package)? Just a wild guess.
>
>
> Am 04.04.19 um 13:14 schrieb cartograflow using gmail.com:
>> I follow up your recommendation and for the moment I didn't used
>> "conflicted".
>>
>> So, I've made the nex R CMD check and I have the problem
>> Error in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck =
>> vI[[i]]) :
>> there is no package called ‘dplyr’
>>
>> How I can solve this issue?
>>
>> Thanks in advance
>>
>> Le jeudi 4 avril 2019 à 08:22:26 UTC+2, Sebastian Meyer
>> <seb.meyer using fau.de> a écrit :
>>
>>
>> Note that output concerning masked objects are just messages which do
>> not cause your vignette to fail. So it is not stricly necessary to start
>> working on these conflicts now.
>>
>> However, looking closely at the win-builder check results
>> (https://win-builder.r-project.org/incoming_pretest/cartograflow_0.0.0.9000_20190324_230822/Windows/00check.log),
>> I see the following output below these messages
>>
>>> Warning in eval(expr, envir, enclos) : NAs introduced by coercion
>>> Quitting from lines 529-573 (cartograflow.Rmd)
>>> Error: processing vignette 'cartograflow.Rmd' failed with diagnostics:
>>> argument is of length zero
>>
>> So the problem actually is in lines 529-573 of the cartograflow.Rmd
>> vignette (at least in the version submitted to win-builder a few weeks ago).
>>
>> Running tools::buildVignette("cartograflow.Rmd") locally, I see
>>
>>> Error in if (horiz) { : argument is of length zero
>>
>> and the subsequent traceback() shows that the error originates from
>>
>>> layoutLayer(title = "Professional mobility in Greater Paris",
>>> coltitle = "black", author = "Cartograflow, 2019", sources =
>> "Sources : data : INSEE, RP, MOBPRO, 2017 ; basemap : IGN, APUR, UMS
>> 2414 RIATE, 2018.",
>>> scale = 0.2, tabtitle = TRUE, frame = TRUE, north(pos =
>> "topright"),
>>> col = "grey")
>>
>> So it seems to me that the unnamed argument 'north(pos = "topright")' is
>> wrongly matched to the "horiz" argument of layoutLayer().
>>
>> Cheers,
>>
>> Sebastian
>>
>>
>> Am 04.04.19 um 07:20 schrieb cartograflow using gmail.com
>> <mailto:cartograflow using gmail.com>:
>>>
>>> Hi,I don't know if my explanations are clear.I tried several way to
>> solve this problem w/o success. Someone have an idea ?Thanks in advance
>>>
>>> On 2019-04-03 2:11 p.m., cartograflow using gmail.com
>> <mailto:cartograflow using gmail.com> wrote:
>>>> Hi,
>>>>
>>>> I come back to you because I have always the problem with
>> devtools::check of my package.
>>>>
>>>> I used the command to check my package with R-devel :
>>>> sylvain using sylvain <mailto:sylvain using sylvain>:~/svn$ bash R-devel.sh CMD
>> check --as-cran
>> /home/sylvain/work/12_R_studio/package/cartograflow_0.0.0.1.tar.gz
>>>>
>>>> When I start the rmd file there is a warning due to package dplyr :
>>>> Attaching package: 'dplyr'
>>>> The following objects are masked from 'package:stats':
>>>> filter, lag
>>>> The following objects are masked from 'package:base':
>>>> intersect, setdiff, setequal, union
>>>>
>>>> The solve this issue I added in rmd file, description file and the
>> namespace the package conflicted.
>>>> So, the package conflicted avoid to have this warning.
>>>>
>>>> But when I run R-devel CMD check I have a new issue that is Error in
>> loadNamespace...no package called ‘conflicted’ (see below)
>>>>
>>>> Can you help me to solve this issue if tit's possible?
>>>> Thanks in advance to your help !
>>>> Sylvain
>>>> -----------------
>>>> Below extract of 00check.log
>>>> * checking whether package ‘cartograflow’ can be installed ... ERROR
>>>> Installation failed.
>>>> See ‘/home/sylvain/svn/cartograflow.Rcheck/00install.out’ for details.
>>>> * DONE
>>>> Status: 1 ERROR, 1 NOTE
>>>>
>>>> Below 00install.out
>>>> * installing *source* package ‘cartograflow’ ...
>>>> ** using staged installation
>>>> ** R
>>>> ** inst
>>>> ** byte-compile and prepare package for lazy loading
>>>> Error in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck =
>> vI[[i]]) :
>>>> there is no package called ‘conflicted’
>>>> Calls: <Anonymous> ... loadNamespace -> withRestarts ->
>> withOneRestart -> doWithOneRestart
>>>> Exécution arrêtée
>>>> ERROR: lazy loading failed for package ‘cartograflow’
>>>> * removing ‘/home/sylvain/svn/cartograflow.Rcheck/cartograflow’
>>>>
>>>>
>>>>
>>>>
>>>>
>>>>
>>>>
>>>> Le mardi 26 mars 2019 à 22:42:21 UTC+1, Henrik Bengtsson
>> <henrik.bengtsson using gmail.com <mailto:henrik.bengtsson using gmail.com>> a écrit :
>>>>
>>>> FWIW, you should be able to reproduce at least the following NOTEs
>>>> with your current R 3.5.2 and R CMD check --as-cran:
>>>>
>>>> * checking CRAN incoming feasibility ... NOTE
>>>> Maintainer: ‘cartogRaflow <cartograflow using gmail.com
>> <mailto:cartograflow using gmail.com>>’
>>>>
>>>> New submission
>>>>
>>>> Version contains large components (0.0.0.9000)
>>>>
>>>> Possibly mis-spelled words in DESCRIPTION:
>>>> flowmapping (7:41)
>>>>
>>>> Author field should be Authors using R. <mailto:Authors using R.> Current value is:
>>>> c(person("Françoise", "Bahoken", email =
>>>> "francoise.bahoken using ifsttar.fr <mailto:francoise.bahoken using ifsttar.fr>",
>> role = c("cre","aut")),
>>>> person("Sylvain", "Blondeau", email =
>>>> "blondeau.sylvain using yahoo.fr <mailto:blondeau.sylvain using yahoo.fr>", role
>> = c("aut"))
>>>>
>>>> The Title field should be in title case. Current version is:
>>>> ‘thematic cartography of flows and movements’
>>>> In title case that is:
>>>> ‘Thematic Cartography of Flows and Movements’
>>>>
>>>> Those are all classical mistakes ("we've all been there"). The
>>>> vignette errors may or may not be specific to R devel.
>>>>
>>>> /Henrik
>>>>
>>>> On Tue, Mar 26, 2019 at 2:29 PM cartograflow using gmail.com
>> <mailto:cartograflow using gmail.com>
>>>> <cartograflow using gmail.com <mailto:cartograflow using gmail.com>> wrote:
>>>>>
>>>>> Hi, l've made R CMD check --as-cran on rstudio 3.5.2Why I have to
>> use r-devel?
>>>>> I confirm that I didn't received à error message when I've made
>> dev_tool::check.
>>>>> How can I solve my problem ?
>>>>> Thanks in advance Sylvain
>>>>>
>>>>>
>>>>> nvoyé depuis Yahoo Mail pour Android
>>>>>
>>>>> Le lun., mars 25, 2019 à 23:38, Uwe
>> Ligges<ligges using statistik.tu-dortmund.de
>> <mailto:ligges using statistik.tu-dortmund.de>> a écrit : I cannot beloeve
>> it. But this is certainly not R-devel?
>>>>>
>>>>> Not sure about devtools which we do not use on CRAN, but simply
>>>>>
>>>>> R CMD check --as-cran
>>>>>
>>>>> with a recent R-devel version on the package tarball should reproduce
>>>>> the findings.
>>>>>
>>>>> Best,
>>>>> Uwe Ligges
>>>>>
>>>>>
>>>>> On 25.03.2019 23:12, cartograflow using gmail.com
>> <mailto:cartograflow using gmail.com> wrote:
>>>>>> Hello,
>>>>>> I've submitted my package cartograflow and I received an email from
>> your teeam that it does not pass the incoming checks
>> automatically.Debian:
>> <https://win-builder.r-project.org/incoming_pretest/cartograflow_0.0.0.9000_20190324_230822/Debian/00check.log>
>>>>>> Status: 1 ERROR, 2 WARNINGs, 1 NOTE
>>>>>>
>>>>>> So, I've made the new check on my plateform (linux ubuntu) and the
>> check is OK.I used : ==> devtools::check(args =
>> c('--no-manual','--as-cran'))Status is :
>>>>>> ── R CMD check results ──────────────────────────── cartograflow
>> 0.0.0.9000 ────
>>>>>> Duration: 54.6s
>>>>>> 0 errors ✔ | 0 warnings ✔ | 0 notes ✔
>>>>>> R CMD check succeeded
>>>>>> Can you help me to fix the problem?
>>>>>> Thanks in advance to your replySylvain
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>>>>>
>>>>>
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