[R-pkg-devel] Making adjustments to the R CMD check/install commands

[Erin Hodgess]

Yay!  I got it to work!  I used the ~/.R/Makevars, and all is well.

Thanks again,
Erin

Erin Hodgess, PhD
mailto: erinm.hodgess using gmail.com


On Mon, Aug 27, 2018 at 2:29 PM Kevin Ushey <kevinushey using gmail.com> wrote:

> Hi Erin,
>
> The R extensions manual should be helpful here -- in particular, see the
> sections on the 'src/Makevars' file and configuration of the Fortran
> compiler:
>
> https://cran.r-project.org/doc/manuals/r-release/R-exts.html#Using-Makevars
>
> In particular, in your 'src/Makevars' file, you'll likely want to set the
> FC variable to choose the Fortran compiler, and FCFLAGS to choose the
> appropriate compilation flags. As an example, you can see how one might set
> these flags to compile code with the address sanitizer active:
>
>
> https://cran.r-project.org/doc/manuals/r-release/R-exts.html#Using-Address-Sanitizer
>
> (Note that this example uses the user-level '~/.R/Makevars' file rather
> than the package-level 'src/Makevars' file, but the crux is the same)
>
> Hope this gets you on the right track,
> Kevin
>
> On Mon, Aug 27, 2018 at 1:15 PM Erin Hodgess <erinm.hodgess using gmail.com>
> wrote:
>
>> Hello!
>>
>> I'm building a package on Windows 10  which uses the PGI Fortran compiler.
>> I have a Makefile set up in the src directory, and when I run "make all",
>> the subroutines compile beautifully.
>>
>> Now I want to create my package.  When I run R CMD check, naturally,
>> gfortran is called.  Is there a way that I can direct the check function
>> to
>> just use the make/Makefile, please?
>>
>> Or am I out of luck, please?  (highly probable)
>>
>> Thanks,
>> Erin
>>
>> Erin Hodgess, PhD
>> mailto: erinm.hodgess using gmail.com
>>
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>>
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>

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