[R-pkg-devel] spell checking of the DESCRIPTION file
dharmapal burne
dhammapalb at uohyd.ac.in
Thu May 18 12:51:17 CEST 2017
Before I change the NAMESPACE file, error is :
--------------------------------------------------------------
* checking examples ... ERROR
Running examples in ‘plfMA-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plfMA
> ### Title: A function to launch the plfMA GUI.
> ### Aliases: plfMA
> ### Keywords: GUI
>
> ### ** Examples
>
> library(plfMA)
> x<-matrix(1:100,ncol=10)
> plfMA(x)
Error: could not find function "plfMA"
Execution halted
--------------------------------------------------------------
Now, I have added the first statement in NAMESPACE file with
--------------------------------------------
exportPattern("^[[:alpha:]]+")
------------------------------------------
The error has gone.
I think, the error is fixed.
On Thu, May 18, 2017 at 2:47 PM, Uwe Ligges <ligges at statistik.tu-dortmund.de
> wrote:
> Well, not running an examples because of an error is a bad idea, you
> should fix the issue that caused the error first.
>
> And when I meant you should make available package and check log I meant
> the version where you did not hide the problems.
>
> Best,
> Uwe Ligges
>
>
> On 18.05.2017 10:55, dharmapal burne wrote:
>
>> Respected Sir/Ma'am.
>>
>> I have checked Description file and man files. In the description field,
>> only text is there but not my name or my PC name.
>>
>> I am not getting errors while checking as cran.
>> But unfornutately, automated checking at CRAN generating errors
>> especially in example section.
>>
>> I have modified the example section to avoid that error (I have used
>> dontrun\{}).
>> This is my 00check.log content:
>> ------------------------------------------------------------
>> ----------------------------
>> * using log directory ‘/home/vvlab/Desktop/pflMA_1.0.4/plfMA.Rcheck’
>> * using R version 3.0.2 (2013-09-25)
>> * using platform: x86_64-pc-linux-gnu (64-bit)
>> * using session charset: UTF-8
>> * checking for file ‘plfMA/DESCRIPTION’ ... OK
>> * checking extension type ... Package
>> * this is package ‘plfMA’ version ‘1.0.4’
>> * checking CRAN incoming feasibility ... OK
>> Maintainer: ‘Dhammapal Bharne <dhammapalb at uohyd.ac.in
>> <mailto:dhammapalb at uohyd.ac.in>>’
>>
>> * checking package namespace information ... OK
>> * checking package dependencies ... OK
>> * checking if this is a source package ... OK
>> * checking if there is a namespace ... OK
>> * checking for executable files ... OK
>> * checking for hidden files and directories ... OK
>> * checking for portable file names ... OK
>> * checking for sufficient/correct file permissions ... OK
>> * checking whether package ‘plfMA’ can be installed ... OK
>> * checking installed package size ... OK
>> * checking package directory ... OK
>> * checking DESCRIPTION meta-information ... OK
>> * checking top-level files ... OK
>> * checking for left-over files ... OK
>> * checking index information ... OK
>> * checking package subdirectories ... OK
>> * checking R files for non-ASCII characters ... OK
>> * checking R files for syntax errors ... OK
>> * checking whether the package can be loaded ... OK
>> * checking whether the package can be loaded with stated dependencies ...
>> OK
>> * checking whether the package can be unloaded cleanly ... OK
>> * checking whether the namespace can be loaded with stated dependencies
>> ... OK
>> * checking whether the namespace can be unloaded cleanly ... OK
>> * checking loading without being on the library search path ... OK
>> * checking dependencies in R code ... OK
>> * checking S3 generic/method consistency ... OK
>> * checking replacement functions ... OK
>> * checking foreign function calls ... OK
>> * checking R code for possible problems ... OK
>> * checking Rd files ... OK
>> * checking Rd metadata ... OK
>> * checking Rd line widths ... OK
>> * checking Rd cross-references ... OK
>> * checking for missing documentation entries ... OK
>> * checking for code/documentation mismatches ... OK
>> * checking Rd \usage sections ... OK
>> * checking Rd contents ... OK
>> * checking for unstated dependencies in examples ... OK
>> * checking examples ... OK
>> * checking PDF version of manual ... OK
>> ------------------------------------------------------------
>> ----------------------------------------
>> I think, there are no errors now.
>> Shall I resubmit the tar file to CRAN?
>>
>> Thank you.
>>
>> On Thu, May 18, 2017 at 1:48 PM, Uwe Ligges
>> <ligges at statistik.tu-dortmund.de
>> <mailto:ligges at statistik.tu-dortmund.de>> wrote:
>>
>>
>>
>> On 18.05.2017 09:07, dharmapal burne wrote:
>>
>> The name is automatically getting generated after executing the
>> command
>> "R CMD build plfMA".
>> It is my system name.
>> I think, we should consider it as false positive.
>>
>>
>> Your system name should not be spell checked, perhapos you provide
>> check log and package on some web resources so that poeple are able
>> tpo help?
>>
>> Best,
>> Uwe Ligges
>>
>>
>>
>> On Thu, May 18, 2017 at 1:01 AM, Uwe Ligges
>> <ligges at statistik.tu-dortmund.de
>> <mailto:ligges at statistik.tu-dortmund.de>
>> <mailto:ligges at statistik.tu-dortmund.de
>> <mailto:ligges at statistik.tu-dortmund.de>>> wrote:
>>
>>
>>
>> On 17.05.2017 16:34, michel.grzebyk at inrs.fr
>> <mailto:michel.grzebyk at inrs.fr>
>> <mailto:michel.grzebyk at inrs.fr
>>
>> <mailto:michel.grzebyk at inrs.fr>> wrote:
>>
>> The spell checking of the DESCRIPTION file of my package
>> have
>> issued a
>> NOTE concerning authors' name of articles appearing in the
>> "description"
>> field.
>> Is there a a way to fix this problem or shall I consider
>> this
>> NOTE as a
>> false positive?
>>
>> I was not able to find any indication in "Writing R
>> Extension"
>> about how
>> to include names in the "description" field.
>>
>>
>> If the spell checks have false positives, that's OK and your
>> package
>> won't be rejected.
>> Nevertheless, software names should be written single quotes
>> as
>> 'package' and functions with parentheses as in foo().
>>
>> Best,
>> Uwe Ligges
>>
>>
>>
>>
>> Best,
>> Michel
>>
>> [[alternative HTML version deleted]]
>>
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>>
>>
>> --
>> Best,
>> *DHAMMAPAL BHARNE,
>> *
>> PhD Research Scholar,
>> *University of Hyderabad,
>> *
>> Mobile: 91 9492274285
>>
>>
>>
>>
>> --
>> Best,
>> *DHAMMAPAL BHARNE,
>> *
>> PhD Research Scholar,
>> *University of Hyderabad,
>> *
>> Mobile: 91 9492274285
>>
>>
--
Best,
*DHAMMAPAL BHARNE,*
PhD Research Scholar,
*University of Hyderabad,*
Mobile: 91 9492274285
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