[R-pkg-devel] R Packages Never Finish Check

[Duncan Murdoch]

On 30/09/2016 12:24 PM, Ortega, Cameron wrote:
> Hi,
>
> When I attempt to run Check on any package, the "checking installed package size..." Check never finishes. This is across multiple versions of R and RStudio, with every package I have attempted to run, including packages confirmed to pass Check quickly and with no issues for others.
>
> I have attempted to run Check using the following methods:
> -Check under the Build tab of RStudio
> -Running devtools::check() from the RStudio console
> -Running R CMD check from the command line
>
> Has anyone experienced Check failing to progress on any step, or have any ideas about what I should try next?

I've never seen that, and I run R CMD check a lot, and devtools::check 
sometimes.  So you're probably stuck debugging it yourself.

Do the usual debugging things:  simplify the process.  You're using 
devtools::check; see if the same thing happens in a terminal running R 
CMD check.  Depending on the answer to that, simplify the package down 
to almost nothing, and see if it still happens.

If you're lucky, it will only happen in devtools::check, and then you 
can see what it is doing that's different than what R CMD check does.  
If they both give the same problem, you might need to dive into the R 
sources to see what "* checking installed package size ..." really does, 
and try running code like that independently.

Duncan Murdoch

>
>
> This is my session info:
> R version 3.3.1 (2016-06-21)
> Platform: x86_64-w64-mingw32/x64 (64-bit)
> Running under: Windows 7 x64 (build 7601) Service Pack 1
>
> locale:
> [1] LC_COLLATE=English_United States.1252  LC_CTYPE=English_United States.1252
> [3] LC_MONETARY=English_United States.1252 LC_NUMERIC=C
> [5] LC_TIME=English_United States.1252
>
> attached base packages:
> [1] stats     graphics  grDevices utils     datasets  methods   base
>
> loaded via a namespace (and not attached):
> [1] tools_3.3.1
>
>
>
>
>
>
>
> This is a print out from the RStudio Check:
> ==> devtools::check()
>
> Updating linkedata documentation
> Loading linkedata
> Writing NAMESPACE
> Writing linkedata.Rd
> Writing linke.Rd
> Setting env vars ---------------------------------------------------------------
> CFLAGS  : -Wall -pedantic
> CXXFLAGS: -Wall -pedantic
> Building linkedata -------------------------------------------------------------
> "C:/PROGRA~1/R/R-33~1.1/bin/x64/R" --no-site-file --no-environ --no-save  \
>    --no-restore --quiet CMD build  \
>    "C:\Users\caort\Documents\Subversion\rcode\lib\src\linkedata"  \
>    --no-resave-data --no-manual
>
> * checking for file 'C:\Users\caort\Documents\Subversion\rcode\lib\src\linkedata/DESCRIPTION' ... OK
> * preparing 'linkedata':
> * checking DESCRIPTION meta-information ... OK
> * checking for LF line-endings in source and make files
> * checking for empty or unneeded directories
> Removed empty directory 'linkedata/zipdta'
> * looking to see if a 'data/datalist' file should be added
> * building 'linkedata_0.1.0.tar.gz'
>
> Setting env vars ---------------------------------------------------------------
> _R_CHECK_CRAN_INCOMING_ : FALSE
> _R_CHECK_FORCE_SUGGESTS_: FALSE
> Checking linkedata -------------------------------------------------------------
> "C:/PROGRA~1/R/R-33~1.1/bin/x64/R" --no-site-file --no-environ --no-save  \
>    --no-restore --quiet CMD check  \
>    "C:\Users\caort\AppData\Local\Temp\Rtmp8EbYiM/linkedata_0.1.0.tar.gz"  \
>    --as-cran --timings --no-manual
>
> * using log directory 'C:/Users/caort/Documents/Subversion/rcode/lib/src/linkedata.Rcheck'
> * using R version 3.3.1 (2016-06-21)
> * using platform: x86_64-w64-mingw32 (64-bit)
> * using session charset: ISO8859-1
> * using options '--no-manual --as-cran'
> * checking for file 'linkedata/DESCRIPTION' ... OK
> * checking extension type ... Package
> * this is package 'linkedata' version '0.1.0'
> * checking package namespace information ... OK
> * checking package dependencies ... NOTE
> Package suggested but not available for checking: 'pvsolcalcs'
> * checking if this is a source package ... OK
> * checking if there is a namespace ... OK
> * checking for executable files ... OK
> * checking for hidden files and directories ... OK
> * checking for portable file names ... OK
> * checking whether package 'linkedata' can be installed ... OK
> * checking installed package size ...
>
>
>
>
>
> **************************************************************************************
> This e-mail and any attachments thereto may contain confidential information and/or information protected by intellectual property rights for the exclusive attention of the intended addressees named above. If you have received this transmission in error, please immediately notify the sender by return e-mail and delete this message and its attachments. Unauthorized use, copying or further full or partial distribution of this e-mail or its contents is prohibited.
> **************************************************************************************
>
> 	[[alternative HTML version deleted]]
>
> ______________________________________________
> R-package-devel at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-package-devel