Hi,



I still seem to be getting errors from trying to run my altered R script, any advice?



Thanks

Jess



Model1A = function(meth_matrix,exposure, X1, X2, X3, batch) {
+
+   mod = lm(methcol ~ exposure+X1+X2+X3+batch, data = meth_matrix)
+
+
+   res=coef(summary(mod))[2,]
+
+
+ }
>
>
> ##Run model1A####
>
> system.time(indiv.results <-mclapply(setNames(seq_len(ncol(cord_betas)), dimnames(cord_betas)[[2]]), Model1A, meth_matrix=cord_betas, exposure=filtered_pheno$Number3Mth, X1=covariates$k032, X2=covariates$k021, X3=covariates$kz029, batch=pdata.B1221.cord$BCDPlate))
   user  system elapsed
  0.044   0.526   0.272
Warning message:
In mclapply(setNames(seq_len(ncol(cord_betas)), dimnames(cord_betas)[[2]]),  :
  all scheduled cores encountered errors in user code

>


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