Hello,

I have a question about interfacing with the Atlas of Living Australia
website: http://biocache.ala.org.au/#tab_simpleSearch

The following code works and I am able to download species observations.
The problem I am having is that I would like additional fields of data. If
I manually download records for a species from ALA then you can choose to
download all records (detailed). I cannot figure out how to automate this.
I specifically need the field “Locality”.   If done correctly this
information would be present in the rawResponse data that is returned from
ALA.

Any help with this problem would be greatly appreciated.

Thanks,
Daisy


species<-"Vinca minor"
nRecords=FALSE
  library(RCurl)
  library(rjson)
   sp <- strsplit(as.character(species)," ")[[1]]
    h <- basicHeaderGatherer()

   BaseALA_Data_URL <- "biocache.ala.org.au"
  Referer <- ""
  DataStr <- paste0("/ws/webportal/occurrences?q=",sp[1],"+",sp[2])
  message("Querying number of records...")
  rawResponse <- getURL(paste0(BaseALA_Data_URL,DataStr), headerfunction =
h$update)
  ResponseCode <- as.integer(h$value()["status"])
  if(ResponseCode == 200) {
    jsres <- fromJSON(rawResponse)
  } else {
    message("No proper response.")
    return(invisible())
  }
  nrecords <- jsres$totalRecords
  if(nRecords)return(nrecords)
  message("Downloading ", nrecords, " records.")
  # Download all
  DataStr <- paste0(DataStr, "&pageSize=", nrecords)
  rawResponse <- getURL(paste0(BaseALA_Data_URL,DataStr), headerfunction =
h$update)
  if(ResponseCode == 200) {
    jsres <- fromJSON(rawResponse)
  } else {
    message("No proper response.")
    return(invisible())
  }
  totalRecords <- jsres$totalRecords
  res <- lapply(jsres$occurrences,
function(x)c(nameSci=x$raw_scientificName,
                                                latitude=x$decimalLatitude,

 longitude=x$decimalLongitude))
  res <- as.data.frame(do.call(rbind, res))
  res$longitude <- as.numeric(as.character(res$longitude))
  res$latitude <- as.numeric(as.character(res$latitude))

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