barcode antibody name gene name protein expression value TCGA-A2-A0CT-01A-11-A13B-20 14-3-3_epsilon-M-C YWHAE -1.517049539 TCGA-A2-A0CT-01A-11-A13B-20 4E-BP1-R-V EIF4EBP1 -.753804075 TCGA-A2-A0CT-01A-11-A13B-20 4E-BP1_pS65-R-V EIF4EBP1 -2.009710173 TCGA-A2-A0CT-01A-11-A13B-20 4E-BP1_pT170-R-V EIF4EBP1 -2.122105696 TCGA-A2-A0CT-01A-11-A13B-20 4E-BP1_pT37-R-V EIF4EBP1 -1.273139423 TCGA-A2-A0CT-01A-11-A13B-20 53BP1-R-C TP53BP1 -.308309649 TCGA-A2-A0CT-01A-11-A13B-20 A-Raf_pS299-R-NA ARAF -2.276498448 TCGA-A2-A0CT-01A-11-A13B-20 ACC1-R-C ACACA 1.313710816 TCGA-A2-A0CT-01A-11-A13B-20 ACC_pS79-R-V ACACA ACACB .825512449 TCGA-A2-A0CT-01A-11-A13B-20 AIB1-M-V NCOA3 -1.282381536 TCGA-A2-A0CT-01A-11-A13B-20 AMPK_alpha-R-C PRKAA1 .160818668 TCGA-A2-A0CT-01A-11-A13B-20 AMPK_pT172-R-V PRKAA1 1.382149095 TCGA-A2-A0CT-01A-11-A13B-20 ANLN-M-NA ANLN .179834412 TCGA-A2-A0CT-01A-11-A13B-20 AR-R-V AR -.323002932 TCGA-A2-A0CT-01A-11-A13B-20 ATM-R-NA ATM .488746874 TCGA-A2-A0CT-01A-11-A13B-20 Akt-R-V AKT1 AKT2 AKT3 .695486458 TCGA-A2-A0CT-01A-11-A13B-20 Akt_pS473-R-V AKT1 AKT2 AKT3 -3.948701795 TCGA-A2-A0CT-01A-11-A13B-20 Akt_pT308-R-V AKT1 AKT2 AKT3 -2.675634089 TCGA-A2-A0CT-01A-11-A13B-20 Annexin_I-R-V ANXA1 1.631554252 TCGA-A2-A0CT-01A-11-A13B-20 B-Raf-M-NA BRAF 1.686312416 TCGA-A2-A0CT-01A-11-A13B-20 Bak-R-C BAK1 .086864741 TCGA-A2-A0CT-01A-11-A13B-20 Bax-R-V BAX .107538761 TCGA-A2-A0CT-01A-11-A13B-20 Bcl-2-M-V BCL2 -.277409392 TCGA-A2-A0CT-01A-11-A13B-20 Bcl-X-R-C BCL2L1 -.672823326 TCGA-A2-A0CT-01A-11-A13B-20 Bcl-xL-R-C BCL2L1 -1.063194241 TCGA-A2-A0CT-01A-11-A13B-20 Beclin-G-V BECN1 .387943768 TCGA-A2-A0CT-01A-11-A13B-20 Bid-R-C BID -1.358619996 TCGA-A2-A0CT-01A-11-A13B-20 Bim-R-V BCL2L11 .216932049 TCGA-A2-A0CT-01A-11-A13B-20 C-Raf-R-V RAF1 -.623574288 TCGA-A2-A0CT-01A-11-A13B-20 C-Raf_pS338-R-C RAF1 -1.329471168 TCGA-A2-A0CT-01A-11-A13B-20 CD31-M-V PECAM1 -.848265158 TCGA-A2-A0CT-01A-11-A13B-20 CD49b-M-V ITGA2 -2.144806094 TCGA-A2-A0CT-01A-11-A13B-20 CDK1-R-V CDC2 -1.31320494 TCGA-A2-A0CT-01A-11-A13B-20 COX-2-R-C PTGS2 -.098297097 TCGA-A2-A0CT-01A-11-A13B-20 Caspase-7_cleavedD198-R-C CASP7 -.334402581 TCGA-A2-A0CT-01A-11-A13B-20 Caspase-8-M-C CASP8 -1.339755299 TCGA-A2-A0CT-01A-11-A13B-20 Caspase-9_cleavedD330-R-C CASP9 -.124925305 TCGA-A2-A0CT-01A-11-A13B-20 Caveolin-1-R-V CAV1 .129651851 TCGA-A2-A0CT-01A-11-A13B-20 Chk1-R-V CHEK1 .198097 TCGA-A2-A0CT-01A-11-A13B-20 Chk1_pS345-R-C CHEK1 -.044670233 TCGA-A2-A0CT-01A-11-A13B-20 Chk2-M-C CHEK2 -.439637489 TCGA-A2-A0CT-01A-11-A13B-20 Chk2_pT68-R-C CHEK2 -1.485647267 TCGA-A2-A0CT-01A-11-A13B-20 Claudin-7-R-V CLDN7 .782493321 TCGA-A2-A0CT-01A-11-A13B-20 Collagen_VI-R-V COL6A1 .683739136 TCGA-A2-A0CT-01A-11-A13B-20 Cyclin_B1-R-V CCNB1 -1.181847249 TCGA-A2-A0CT-01A-11-A13B-20 Cyclin_D1-R-V CCND1 .300988692 TCGA-A2-A0CT-01A-11-A13B-20 Cyclin_E1-M-V CCNE1 -2.300352817 TCGA-A2-A0CT-01A-11-A13B-20 DJ-1-R-C PARK7 .908040584 TCGA-A2-A0CT-01A-11-A13B-20 Dvl3-R-V DVL3 -1.104655314 TCGA-A2-A0CT-01A-11-A13B-20 E-Cadherin-R-V CDH1 2.231114351 TCGA-A2-A0CT-01A-11-A13B-20 EGFR-R-C EGFR -1.650004893 TCGA-A2-A0CT-01A-11-A13B-20 EGFR_pY1068-R-V EGFR -4.331172626 TCGA-A2-A0CT-01A-11-A13B-20 EGFR_pY1173-R-C EGFR -1.464306361 TCGA-A2-A0CT-01A-11-A13B-20 EGFR_pY992-R-V EGFR -1.016381395 TCGA-A2-A0CT-01A-11-A13B-20 ER-alpha-R-V ESR1 4.176251614 TCGA-A2-A0CT-01A-11-A13B-20 ER-alpha_pS118-R-V ESR1 .051121217 TCGA-A2-A0CT-01A-11-A13B-20 ERCC1-M-C ERCC1 .749281485 TCGA-A2-A0CT-01A-11-A13B-20 ERK2-R-NA MAPK1 4.163636113 TCGA-A2-A0CT-01A-11-A13B-20 FAK-R-C PTK2 2.314599277 TCGA-A2-A0CT-01A-11-A13B-20 FOXO3a-R-C FOXO3 -.347516602 TCGA-A2-A0CT-01A-11-A13B-20 FOXO3a_pS318_S321-R-C FOXO3 .379131067 TCGA-A2-A0CT-01A-11-A13B-20 Fibronectin-R-C FN1 6.791210755 TCGA-A2-A0CT-01A-11-A13B-20 GAB2-R-V GAB2 -.477670604 TCGA-A2-A0CT-01A-11-A13B-20 GATA3-M-V GATA3 2.278024537 TCGA-A2-A0CT-01A-11-A13B-20 GSK3-alpha-beta-M-V GSK3A GSK3B 2.660806582 TCGA-A2-A0CT-01A-11-A13B-20 GSK3-alpha-beta_pS21_S9-R-V GSK3A GSK3B 1.970079766 TCGA-A2-A0CT-01A-11-A13B-20 HER2-M-V ERBB2 1.145039262 TCGA-A2-A0CT-01A-11-A13B-20 HER2_pY1248-R-V ERBB2 -.969076458 TCGA-A2-A0CT-01A-11-A13B-20 HER3-M-C ERBB3 .29536223 TCGA-A2-A0CT-01A-11-A13B-20 HER3_pY1298-R-V ERBB3 4.672505066 TCGA-A2-A0CT-01A-11-A13B-20 HSP70-R-C HSPA1A -.196640611 TCGA-A2-A0CT-01A-11-A13B-20 IGF-1R-beta-R-C IGF1R -.775481574 TCGA-A2-A0CT-01A-11-A13B-20 IGFBP2-R-V IGFBP2 .234332412 TCGA-A2-A0CT-01A-11-A13B-20 INPP4B-G-C INPP4B 2.237529166 TCGA-A2-A0CT-01A-11-A13B-20 IRS1-R-V IRS1 .509211578 TCGA-A2-A0CT-01A-11-A13B-20 JNK2-R-C MAPK9 -1.195256316 TCGA-A2-A0CT-01A-11-A13B-20 K-Ras-M-C KRAS -.469203317 TCGA-A2-A0CT-01A-11-A13B-20 Ku80-R-C XRCC5 1.168133873 TCGA-A2-A0CT-01A-11-A13B-20 LBK1-M-NA STK11 1.005103945 TCGA-A2-A0CT-01A-11-A13B-20 Lck-R-V LCK -1.924262173 TCGA-A2-A0CT-01A-11-A13B-20 MAPK_pT202_Y204-R-V MAPK1 MAPK3 .673957785 TCGA-A2-A0CT-01A-11-A13B-20 MEK1-R-V MAP2K1 .141471772 TCGA-A2-A0CT-01A-11-A13B-20 MEK1_pS217_S221-R-V MAP2K1 1.035669355 TCGA-A2-A0CT-01A-11-A13B-20 MIG-6-M-V ERRFI1 -.260390541 TCGA-A2-A0CT-01A-11-A13B-20 MSH2-M-C MSH2 -.474357168 TCGA-A2-A0CT-01A-11-A13B-20 MSH6-R-C MSH6 1.41008002 TCGA-A2-A0CT-01A-11-A13B-20 Mre11-R-C MRE11A .612935305 TCGA-A2-A0CT-01A-11-A13B-20 N-Cadherin-R-V CDH2 -1.891149547 TCGA-A2-A0CT-01A-11-A13B-20 NF-kB-p65_pS536-R-C NFKB1 -1.561089771 TCGA-A2-A0CT-01A-11-A13B-20 NF2-R-C NF2 .69673299 TCGA-A2-A0CT-01A-11-A13B-20 Notch1-R-V NOTCH1 -2.567765496 TCGA-A2-A0CT-01A-11-A13B-20 Notch3-R-C NOTCH3 -.068066625 TCGA-A2-A0CT-01A-11-A13B-20 P-Cadherin-R-C CDH3 -1.753883422 TCGA-A2-A0CT-01A-11-A13B-20 PARP_cleaved-M-C PARP1 -2.272590739 TCGA-A2-A0CT-01A-11-A13B-20 PCNA-M-V PCNA -1.337941583 TCGA-A2-A0CT-01A-11-A13B-20 PDK1_pS241-R-V PDK1 .884941585 TCGA-A2-A0CT-01A-11-A13B-20 PI3K-p110-alpha-R-C PIK3CA -2.140735887 TCGA-A2-A0CT-01A-11-A13B-20 PKC-alpha-M-V PRKCA .596259601 TCGA-A2-A0CT-01A-11-A13B-20 PKC-alpha_pS657-R-V PRKCA -1.709971865 TCGA-A2-A0CT-01A-11-A13B-20 PKC-delta_pS664-R-V PRKCD -.848192703 TCGA-A2-A0CT-01A-11-A13B-20 PR-R-V PGR -4.12951692 TCGA-A2-A0CT-01A-11-A13B-20 PRAS40_pT246-R-V AKT1S1 -1.40453825 TCGA-A2-A0CT-01A-11-A13B-20 PRDX1-R-NA PRDX1 -1.802978044 TCGA-A2-A0CT-01A-11-A13B-20 PTCH-R-C PTCH1 .426878343 TCGA-A2-A0CT-01A-11-A13B-20 PTEN-R-V PTEN -.643609418 TCGA-A2-A0CT-01A-11-A13B-20 Paxillin-R-V PXN -.479307718 TCGA-A2-A0CT-01A-11-A13B-20 Pea-15-R-V PEA15 .917537902 TCGA-A2-A0CT-01A-11-A13B-20 RBM3-M-NA RBM3 2.053445634 TCGA-A2-A0CT-01A-11-A13B-20 Rab25-R-C RAB25 -2.205758777 TCGA-A2-A0CT-01A-11-A13B-20 Rad50-M-C RAD50 .281500271 TCGA-A2-A0CT-01A-11-A13B-20 Rad51-M-C RAD51 -1.125676509 TCGA-A2-A0CT-01A-11-A13B-20 Rb-M-V RB1 -1.019944431 TCGA-A2-A0CT-01A-11-A13B-20 Rb_pS807_S811-R-V RB1 -1.770109207 TCGA-A2-A0CT-01A-11-A13B-20 S6-R-NA RPS6 -.785172966 TCGA-A2-A0CT-01A-11-A13B-20 S6_pS235_S236-R-V RPS6 -3.662191416 TCGA-A2-A0CT-01A-11-A13B-20 S6_pS240_S244-R-V RPS6 -1.888818963 TCGA-A2-A0CT-01A-11-A13B-20 SETD2-R-NA SETD2 -.646702622 TCGA-A2-A0CT-01A-11-A13B-20 STAT3_pY705-R-V STAT3 -2.033494997 TCGA-A2-A0CT-01A-11-A13B-20 STAT5-alpha-R-V STAT5A 1.002207509 TCGA-A2-A0CT-01A-11-A13B-20 Shc_pY317-R-NA SHC1 -3.616108167 TCGA-A2-A0CT-01A-11-A13B-20 Smac-M-V DIABLO -.054046639 TCGA-A2-A0CT-01A-11-A13B-20 Smad1-R-V SMAD1 .014113943 TCGA-A2-A0CT-01A-11-A13B-20 Smad3-R-V SMAD3 -1.360279315 TCGA-A2-A0CT-01A-11-A13B-20 Smad4-M-C SMAD4 -.337432565 TCGA-A2-A0CT-01A-11-A13B-20 Snail-M-C SNAI2 -1.967252416 TCGA-A2-A0CT-01A-11-A13B-20 Src-M-V SRC -1.169995138 TCGA-A2-A0CT-01A-11-A13B-20 Src_pY416-R-C SRC -2.808844516 TCGA-A2-A0CT-01A-11-A13B-20 Src_pY527-R-V SRC -2.672489891 TCGA-A2-A0CT-01A-11-A13B-20 Stathmin-R-V STMN1 -.905458351 TCGA-A2-A0CT-01A-11-A13B-20 Syk-M-V SYK -.769386908 TCGA-A2-A0CT-01A-11-A13B-20 TAZ_pS89-R-C WWTR1 .412738143 TCGA-A2-A0CT-01A-11-A13B-20 Tau-M-C MAPT -1.120396469 TCGA-A2-A0CT-01A-11-A13B-20 Transglutaminase-M-V TGM2 1.222616788 TCGA-A2-A0CT-01A-11-A13B-20 Tuberin-R-C TSC2 .042636997 TCGA-A2-A0CT-01A-11-A13B-20 VASP-R-C VASP -.131849867 TCGA-A2-A0CT-01A-11-A13B-20 VEGFR2-R-C KDR 2.1053917 TCGA-A2-A0CT-01A-11-A13B-20 XBP1-G-C XBP1 .178101135 TCGA-A2-A0CT-01A-11-A13B-20 XIAP-R-C XIAP -1.361469766 TCGA-A2-A0CT-01A-11-A13B-20 XRCC1-R-C XRCC1 -.539865855 TCGA-A2-A0CT-01A-11-A13B-20 YAP-R-V YAP1 .528868352 TCGA-A2-A0CT-01A-11-A13B-20 YAP_pS127-R-C YAP1 .525409 TCGA-A2-A0CT-01A-11-A13B-20 YB-1-R-V YBX1 .311755537 TCGA-A2-A0CT-01A-11-A13B-20 YB-1_pS102-R-V YBX1 -1.856738785 TCGA-A2-A0CT-01A-11-A13B-20 alpha-Catenin-M-V CTNNA1 .27472255 TCGA-A2-A0CT-01A-11-A13B-20 beta-Catenin-R-V CTNNB1 2.534590327 TCGA-A2-A0CT-01A-11-A13B-20 c-Jun_pS73-R-C JUN -2.134103287 TCGA-A2-A0CT-01A-11-A13B-20 c-Kit-R-V KIT -1.872248717 TCGA-A2-A0CT-01A-11-A13B-20 c-Met-M-C MET -.040422757 TCGA-A2-A0CT-01A-11-A13B-20 c-Met_pY1235-R-C MET -.800850931 TCGA-A2-A0CT-01A-11-A13B-20 c-Myc-R-C MYC -.670990922 TCGA-A2-A0CT-01A-11-A13B-20 cIAP-R-V BIRC2 .871543004 TCGA-A2-A0CT-01A-11-A13B-20 eEF2-R-V EEF2 -2.148176074 TCGA-A2-A0CT-01A-11-A13B-20 eEF2K-R-V EEF2K -.538510788 TCGA-A2-A0CT-01A-11-A13B-20 eIF4E-R-V EIF4E .111890513 TCGA-A2-A0CT-01A-11-A13B-20 mTOR-R-V FRAP1 2.358243679 TCGA-A2-A0CT-01A-11-A13B-20 p21-R-C CDKN1A -.551844212 TCGA-A2-A0CT-01A-11-A13B-20 p27-R-V CDKN1B -.132168216 TCGA-A2-A0CT-01A-11-A13B-20 p27_pT157-R-C CDKN1B -1.390831491 TCGA-A2-A0CT-01A-11-A13B-20 p27_pT198-R-V CDKN1B -1.525681228 TCGA-A2-A0CT-01A-11-A13B-20 p38_MAPK-R-C MAPK14 -.98822557 TCGA-A2-A0CT-01A-11-A13B-20 p38_pT180_Y182-R-V MAPK14 -1.158079719 TCGA-A2-A0CT-01A-11-A13B-20 p53-R-V TP53 -3.383114989 TCGA-A2-A0CT-01A-11-A13B-20 p70S6K-R-V RPS6KB1 1.087634438 TCGA-A2-A0CT-01A-11-A13B-20 p70S6K_pT389-R-V RPS6KB1 -2.835766239 TCGA-A2-A0CT-01A-11-A13B-20 p90RSK_pT359_S363-R-C RPS6KA1 -1.020105257