barcode antibody name gene name protein expression value TCGA-A2-A0CS-01A-21-A13B-20 14-3-3_epsilon-M-C YWHAE -1.48082172 TCGA-A2-A0CS-01A-21-A13B-20 4E-BP1-R-V EIF4EBP1 -.847822642 TCGA-A2-A0CS-01A-21-A13B-20 4E-BP1_pS65-R-V EIF4EBP1 -2.153641715 TCGA-A2-A0CS-01A-21-A13B-20 4E-BP1_pT170-R-V EIF4EBP1 -2.137044077 TCGA-A2-A0CS-01A-21-A13B-20 4E-BP1_pT37-R-V EIF4EBP1 -1.294181497 TCGA-A2-A0CS-01A-21-A13B-20 53BP1-R-C TP53BP1 .569456818 TCGA-A2-A0CS-01A-21-A13B-20 A-Raf_pS299-R-NA ARAF -1.710610834 TCGA-A2-A0CS-01A-21-A13B-20 ACC1-R-C ACACA .946772673 TCGA-A2-A0CS-01A-21-A13B-20 ACC_pS79-R-V ACACA ACACB .631509619 TCGA-A2-A0CS-01A-21-A13B-20 AIB1-M-V NCOA3 -1.537942467 TCGA-A2-A0CS-01A-21-A13B-20 AMPK_alpha-R-C PRKAA1 .125181749 TCGA-A2-A0CS-01A-21-A13B-20 AMPK_pT172-R-V PRKAA1 1.243398272 TCGA-A2-A0CS-01A-21-A13B-20 ANLN-M-NA ANLN .130617277 TCGA-A2-A0CS-01A-21-A13B-20 AR-R-V AR .398197554 TCGA-A2-A0CS-01A-21-A13B-20 ATM-R-NA ATM 1.129232792 TCGA-A2-A0CS-01A-21-A13B-20 Akt-R-V AKT1 AKT2 AKT3 .958909539 TCGA-A2-A0CS-01A-21-A13B-20 Akt_pS473-R-V AKT1 AKT2 AKT3 -1.501204705 TCGA-A2-A0CS-01A-21-A13B-20 Akt_pT308-R-V AKT1 AKT2 AKT3 -.46749553 TCGA-A2-A0CS-01A-21-A13B-20 Annexin_I-R-V ANXA1 3.017073335 TCGA-A2-A0CS-01A-21-A13B-20 B-Raf-M-NA BRAF 1.375249768 TCGA-A2-A0CS-01A-21-A13B-20 Bak-R-C BAK1 .229848717 TCGA-A2-A0CS-01A-21-A13B-20 Bax-R-V BAX .125637755 TCGA-A2-A0CS-01A-21-A13B-20 Bcl-2-M-V BCL2 -.503229883 TCGA-A2-A0CS-01A-21-A13B-20 Bcl-X-R-C BCL2L1 -1.080010092 TCGA-A2-A0CS-01A-21-A13B-20 Bcl-xL-R-C BCL2L1 -1.252613531 TCGA-A2-A0CS-01A-21-A13B-20 Beclin-G-V BECN1 .522675467 TCGA-A2-A0CS-01A-21-A13B-20 Bid-R-C BID -1.491414828 TCGA-A2-A0CS-01A-21-A13B-20 Bim-R-V BCL2L11 -.98343679 TCGA-A2-A0CS-01A-21-A13B-20 C-Raf-R-V RAF1 -1.01656063 TCGA-A2-A0CS-01A-21-A13B-20 C-Raf_pS338-R-C RAF1 -1.359183231 TCGA-A2-A0CS-01A-21-A13B-20 CD31-M-V PECAM1 -1.081732171 TCGA-A2-A0CS-01A-21-A13B-20 CD49b-M-V ITGA2 -2.182200283 TCGA-A2-A0CS-01A-21-A13B-20 CDK1-R-V CDC2 -1.701024749 TCGA-A2-A0CS-01A-21-A13B-20 COX-2-R-C PTGS2 .098789993 TCGA-A2-A0CS-01A-21-A13B-20 Caspase-7_cleavedD198-R-C CASP7 -.439935523 TCGA-A2-A0CS-01A-21-A13B-20 Caspase-8-M-C CASP8 -1.013987991 TCGA-A2-A0CS-01A-21-A13B-20 Caspase-9_cleavedD330-R-C CASP9 -.450183048 TCGA-A2-A0CS-01A-21-A13B-20 Caveolin-1-R-V CAV1 1.805559903 TCGA-A2-A0CS-01A-21-A13B-20 Chk1-R-V CHEK1 -.076384352 TCGA-A2-A0CS-01A-21-A13B-20 Chk1_pS345-R-C CHEK1 -.274695214 TCGA-A2-A0CS-01A-21-A13B-20 Chk2-M-C CHEK2 -1.0427241 TCGA-A2-A0CS-01A-21-A13B-20 Chk2_pT68-R-C CHEK2 -1.755990194 TCGA-A2-A0CS-01A-21-A13B-20 Claudin-7-R-V CLDN7 .0725202990000001 TCGA-A2-A0CS-01A-21-A13B-20 Collagen_VI-R-V COL6A1 .774839579 TCGA-A2-A0CS-01A-21-A13B-20 Cyclin_B1-R-V CCNB1 -1.157827604 TCGA-A2-A0CS-01A-21-A13B-20 Cyclin_D1-R-V CCND1 -.63306823 TCGA-A2-A0CS-01A-21-A13B-20 Cyclin_E1-M-V CCNE1 -2.836635772 TCGA-A2-A0CS-01A-21-A13B-20 DJ-1-R-C PARK7 .744627426 TCGA-A2-A0CS-01A-21-A13B-20 Dvl3-R-V DVL3 -.651169782 TCGA-A2-A0CS-01A-21-A13B-20 E-Cadherin-R-V CDH1 1.081510779 TCGA-A2-A0CS-01A-21-A13B-20 EGFR-R-C EGFR -2.274880052 TCGA-A2-A0CS-01A-21-A13B-20 EGFR_pY1068-R-V EGFR -4.845116979 TCGA-A2-A0CS-01A-21-A13B-20 EGFR_pY1173-R-C EGFR -1.655890344 TCGA-A2-A0CS-01A-21-A13B-20 EGFR_pY992-R-V EGFR -1.336272273 TCGA-A2-A0CS-01A-21-A13B-20 ER-alpha-R-V ESR1 2.470581704 TCGA-A2-A0CS-01A-21-A13B-20 ER-alpha_pS118-R-V ESR1 1.479911999 TCGA-A2-A0CS-01A-21-A13B-20 ERCC1-M-C ERCC1 .525173409 TCGA-A2-A0CS-01A-21-A13B-20 ERK2-R-NA MAPK1 3.762910408 TCGA-A2-A0CS-01A-21-A13B-20 FAK-R-C PTK2 1.395202164 TCGA-A2-A0CS-01A-21-A13B-20 FOXO3a-R-C FOXO3 -.405125706 TCGA-A2-A0CS-01A-21-A13B-20 FOXO3a_pS318_S321-R-C FOXO3 .574106104 TCGA-A2-A0CS-01A-21-A13B-20 Fibronectin-R-C FN1 7.239024336 TCGA-A2-A0CS-01A-21-A13B-20 GAB2-R-V GAB2 -.557138289 TCGA-A2-A0CS-01A-21-A13B-20 GATA3-M-V GATA3 1.054251873 TCGA-A2-A0CS-01A-21-A13B-20 GSK3-alpha-beta-M-V GSK3A GSK3B 2.51147805 TCGA-A2-A0CS-01A-21-A13B-20 GSK3-alpha-beta_pS21_S9-R-V GSK3A GSK3B 2.406087458 TCGA-A2-A0CS-01A-21-A13B-20 HER2-M-V ERBB2 .096238963 TCGA-A2-A0CS-01A-21-A13B-20 HER2_pY1248-R-V ERBB2 -1.685191497 TCGA-A2-A0CS-01A-21-A13B-20 HER3-M-C ERBB3 .446910339 TCGA-A2-A0CS-01A-21-A13B-20 HER3_pY1298-R-V ERBB3 4.379035527 TCGA-A2-A0CS-01A-21-A13B-20 HSP70-R-C HSPA1A -.41396072 TCGA-A2-A0CS-01A-21-A13B-20 IGF-1R-beta-R-C IGF1R -.0670651149999999 TCGA-A2-A0CS-01A-21-A13B-20 IGFBP2-R-V IGFBP2 -.456985514 TCGA-A2-A0CS-01A-21-A13B-20 INPP4B-G-C INPP4B 1.274083296 TCGA-A2-A0CS-01A-21-A13B-20 IRS1-R-V IRS1 .537171478 TCGA-A2-A0CS-01A-21-A13B-20 JNK2-R-C MAPK9 -.551566376 TCGA-A2-A0CS-01A-21-A13B-20 K-Ras-M-C KRAS -.619707818 TCGA-A2-A0CS-01A-21-A13B-20 Ku80-R-C XRCC5 1.090891846 TCGA-A2-A0CS-01A-21-A13B-20 LBK1-M-NA STK11 .820907599 TCGA-A2-A0CS-01A-21-A13B-20 Lck-R-V LCK -1.775136445 TCGA-A2-A0CS-01A-21-A13B-20 MAPK_pT202_Y204-R-V MAPK1 MAPK3 2.806285478 TCGA-A2-A0CS-01A-21-A13B-20 MEK1-R-V MAP2K1 .827582953 TCGA-A2-A0CS-01A-21-A13B-20 MEK1_pS217_S221-R-V MAP2K1 1.508640125 TCGA-A2-A0CS-01A-21-A13B-20 MIG-6-M-V ERRFI1 -.819968069 TCGA-A2-A0CS-01A-21-A13B-20 MSH2-M-C MSH2 -.925347731 TCGA-A2-A0CS-01A-21-A13B-20 MSH6-R-C MSH6 1.660339358 TCGA-A2-A0CS-01A-21-A13B-20 Mre11-R-C MRE11A .415022408 TCGA-A2-A0CS-01A-21-A13B-20 N-Cadherin-R-V CDH2 -2.363252526 TCGA-A2-A0CS-01A-21-A13B-20 NF-kB-p65_pS536-R-C NFKB1 .104630673 TCGA-A2-A0CS-01A-21-A13B-20 NF2-R-C NF2 -.248165124 TCGA-A2-A0CS-01A-21-A13B-20 Notch1-R-V NOTCH1 -2.652363254 TCGA-A2-A0CS-01A-21-A13B-20 Notch3-R-C NOTCH3 -.229683942 TCGA-A2-A0CS-01A-21-A13B-20 P-Cadherin-R-C CDH3 -1.158485984 TCGA-A2-A0CS-01A-21-A13B-20 PARP_cleaved-M-C PARP1 -2.395339087 TCGA-A2-A0CS-01A-21-A13B-20 PCNA-M-V PCNA -1.652798451 TCGA-A2-A0CS-01A-21-A13B-20 PDK1_pS241-R-V PDK1 .351039308 TCGA-A2-A0CS-01A-21-A13B-20 PI3K-p110-alpha-R-C PIK3CA -2.27518318 TCGA-A2-A0CS-01A-21-A13B-20 PKC-alpha-M-V PRKCA .966424021 TCGA-A2-A0CS-01A-21-A13B-20 PKC-alpha_pS657-R-V PRKCA -.79364381 TCGA-A2-A0CS-01A-21-A13B-20 PKC-delta_pS664-R-V PRKCD -.750878225 TCGA-A2-A0CS-01A-21-A13B-20 PR-R-V PGR 1.432218483 TCGA-A2-A0CS-01A-21-A13B-20 PRAS40_pT246-R-V AKT1S1 -.861383005 TCGA-A2-A0CS-01A-21-A13B-20 PRDX1-R-NA PRDX1 -1.826268683 TCGA-A2-A0CS-01A-21-A13B-20 PTCH-R-C PTCH1 .88172558 TCGA-A2-A0CS-01A-21-A13B-20 PTEN-R-V PTEN -.205519197 TCGA-A2-A0CS-01A-21-A13B-20 Paxillin-R-V PXN .0158715260000001 TCGA-A2-A0CS-01A-21-A13B-20 Pea-15-R-V PEA15 .55259409 TCGA-A2-A0CS-01A-21-A13B-20 RBM3-M-NA RBM3 1.523956593 TCGA-A2-A0CS-01A-21-A13B-20 Rab25-R-C RAB25 -2.210226975 TCGA-A2-A0CS-01A-21-A13B-20 Rad50-M-C RAD50 .315210772 TCGA-A2-A0CS-01A-21-A13B-20 Rad51-M-C RAD51 -1.279359484 TCGA-A2-A0CS-01A-21-A13B-20 Rb-M-V RB1 -1.190892547 TCGA-A2-A0CS-01A-21-A13B-20 Rb_pS807_S811-R-V RB1 -.680390329 TCGA-A2-A0CS-01A-21-A13B-20 S6-R-NA RPS6 -.387627687 TCGA-A2-A0CS-01A-21-A13B-20 S6_pS235_S236-R-V RPS6 -2.782240252 TCGA-A2-A0CS-01A-21-A13B-20 S6_pS240_S244-R-V RPS6 -1.929011597 TCGA-A2-A0CS-01A-21-A13B-20 SETD2-R-NA SETD2 -.905635503 TCGA-A2-A0CS-01A-21-A13B-20 STAT3_pY705-R-V STAT3 -2.078374545 TCGA-A2-A0CS-01A-21-A13B-20 STAT5-alpha-R-V STAT5A 1.077201726 TCGA-A2-A0CS-01A-21-A13B-20 Shc_pY317-R-NA SHC1 -3.629024682 TCGA-A2-A0CS-01A-21-A13B-20 Smac-M-V DIABLO -.273840713 TCGA-A2-A0CS-01A-21-A13B-20 Smad1-R-V SMAD1 .0341807980000001 TCGA-A2-A0CS-01A-21-A13B-20 Smad3-R-V SMAD3 -1.639326424 TCGA-A2-A0CS-01A-21-A13B-20 Smad4-M-C SMAD4 -.418582637 TCGA-A2-A0CS-01A-21-A13B-20 Snail-M-C SNAI2 -1.931135079 TCGA-A2-A0CS-01A-21-A13B-20 Src-M-V SRC -1.182378494 TCGA-A2-A0CS-01A-21-A13B-20 Src_pY416-R-C SRC -2.697279586 TCGA-A2-A0CS-01A-21-A13B-20 Src_pY527-R-V SRC -2.7803886 TCGA-A2-A0CS-01A-21-A13B-20 Stathmin-R-V STMN1 -1.10384191 TCGA-A2-A0CS-01A-21-A13B-20 Syk-M-V SYK .235944501 TCGA-A2-A0CS-01A-21-A13B-20 TAZ_pS89-R-C WWTR1 -.00734361799999991 TCGA-A2-A0CS-01A-21-A13B-20 Tau-M-C MAPT -.738533507 TCGA-A2-A0CS-01A-21-A13B-20 Transglutaminase-M-V TGM2 1.001296129 TCGA-A2-A0CS-01A-21-A13B-20 Tuberin-R-C TSC2 -.108017589 TCGA-A2-A0CS-01A-21-A13B-20 VASP-R-C VASP .219300824 TCGA-A2-A0CS-01A-21-A13B-20 VEGFR2-R-C KDR 3.093376801 TCGA-A2-A0CS-01A-21-A13B-20 XBP1-G-C XBP1 .110114843 TCGA-A2-A0CS-01A-21-A13B-20 XIAP-R-C XIAP -1.256527138 TCGA-A2-A0CS-01A-21-A13B-20 XRCC1-R-C XRCC1 -.802236016 TCGA-A2-A0CS-01A-21-A13B-20 YAP-R-V YAP1 .896265105 TCGA-A2-A0CS-01A-21-A13B-20 YAP_pS127-R-C YAP1 1.064916148 TCGA-A2-A0CS-01A-21-A13B-20 YB-1-R-V YBX1 .633638314 TCGA-A2-A0CS-01A-21-A13B-20 YB-1_pS102-R-V YBX1 -.490542842 TCGA-A2-A0CS-01A-21-A13B-20 alpha-Catenin-M-V CTNNA1 -.268439349 TCGA-A2-A0CS-01A-21-A13B-20 beta-Catenin-R-V CTNNB1 1.90946961 TCGA-A2-A0CS-01A-21-A13B-20 c-Jun_pS73-R-C JUN -1.991428353 TCGA-A2-A0CS-01A-21-A13B-20 c-Kit-R-V KIT -1.788441935 TCGA-A2-A0CS-01A-21-A13B-20 c-Met-M-C MET -.165572945 TCGA-A2-A0CS-01A-21-A13B-20 c-Met_pY1235-R-C MET -.960772658 TCGA-A2-A0CS-01A-21-A13B-20 c-Myc-R-C MYC -.699572369 TCGA-A2-A0CS-01A-21-A13B-20 cIAP-R-V BIRC2 .969387603 TCGA-A2-A0CS-01A-21-A13B-20 eEF2-R-V EEF2 -2.185157966 TCGA-A2-A0CS-01A-21-A13B-20 eEF2K-R-V EEF2K -.925333655 TCGA-A2-A0CS-01A-21-A13B-20 eIF4E-R-V EIF4E -.294281884 TCGA-A2-A0CS-01A-21-A13B-20 mTOR-R-V FRAP1 2.487123403 TCGA-A2-A0CS-01A-21-A13B-20 p21-R-C CDKN1A -.37013374 TCGA-A2-A0CS-01A-21-A13B-20 p27-R-V CDKN1B -1.094717547 TCGA-A2-A0CS-01A-21-A13B-20 p27_pT157-R-C CDKN1B -1.467934533 TCGA-A2-A0CS-01A-21-A13B-20 p27_pT198-R-V CDKN1B -1.667448198 TCGA-A2-A0CS-01A-21-A13B-20 p38_MAPK-R-C MAPK14 -.945686716 TCGA-A2-A0CS-01A-21-A13B-20 p38_pT180_Y182-R-V MAPK14 -.402494765 TCGA-A2-A0CS-01A-21-A13B-20 p53-R-V TP53 -3.667055306 TCGA-A2-A0CS-01A-21-A13B-20 p70S6K-R-V RPS6KB1 .51657459 TCGA-A2-A0CS-01A-21-A13B-20 p70S6K_pT389-R-V RPS6KB1 -2.641760574 TCGA-A2-A0CS-01A-21-A13B-20 p90RSK_pT359_S363-R-C RPS6KA1 -.391518864