barcode antibody name gene name protein expression value TCGA-A2-A0CM-01A-21-A13C-20 14-3-3_epsilon-M-C YWHAE -1.677866889 TCGA-A2-A0CM-01A-21-A13C-20 4E-BP1-R-V EIF4EBP1 -.419514887 TCGA-A2-A0CM-01A-21-A13C-20 4E-BP1_pS65-R-V EIF4EBP1 -1.749327312 TCGA-A2-A0CM-01A-21-A13C-20 4E-BP1_pT170-R-V EIF4EBP1 -1.927882769 TCGA-A2-A0CM-01A-21-A13C-20 4E-BP1_pT37-R-V EIF4EBP1 -.708809524 TCGA-A2-A0CM-01A-21-A13C-20 53BP1-R-C TP53BP1 .743871979 TCGA-A2-A0CM-01A-21-A13C-20 A-Raf_pS299-R-NA ARAF -2.035217392 TCGA-A2-A0CM-01A-21-A13C-20 ACC1-R-C ACACA -.0690052489999999 TCGA-A2-A0CM-01A-21-A13C-20 ACC_pS79-R-V ACACA ACACB -.457483956 TCGA-A2-A0CM-01A-21-A13C-20 AIB1-M-V NCOA3 -1.411186458 TCGA-A2-A0CM-01A-21-A13C-20 AMPK_alpha-R-C PRKAA1 -.098547899 TCGA-A2-A0CM-01A-21-A13C-20 AMPK_pT172-R-V PRKAA1 .8708664 TCGA-A2-A0CM-01A-21-A13C-20 ANLN-M-NA ANLN .378957551 TCGA-A2-A0CM-01A-21-A13C-20 AR-R-V AR -1.917454935 TCGA-A2-A0CM-01A-21-A13C-20 ATM-R-NA ATM 1.058813777 TCGA-A2-A0CM-01A-21-A13C-20 Akt-R-V AKT1 AKT2 AKT3 .673092175 TCGA-A2-A0CM-01A-21-A13C-20 Akt_pS473-R-V AKT1 AKT2 AKT3 -3.335813569 TCGA-A2-A0CM-01A-21-A13C-20 Akt_pT308-R-V AKT1 AKT2 AKT3 -2.710241906 TCGA-A2-A0CM-01A-21-A13C-20 Annexin_I-R-V ANXA1 2.973321198 TCGA-A2-A0CM-01A-21-A13C-20 B-Raf-M-NA BRAF 1.374731888 TCGA-A2-A0CM-01A-21-A13C-20 Bak-R-C BAK1 -.0722186199999999 TCGA-A2-A0CM-01A-21-A13C-20 Bax-R-V BAX -.0756884429999999 TCGA-A2-A0CM-01A-21-A13C-20 Bcl-2-M-V BCL2 -2.37556604 TCGA-A2-A0CM-01A-21-A13C-20 Bcl-X-R-C BCL2L1 -1.145494168 TCGA-A2-A0CM-01A-21-A13C-20 Bcl-xL-R-C BCL2L1 -1.357714036 TCGA-A2-A0CM-01A-21-A13C-20 Beclin-G-V BECN1 .546708867 TCGA-A2-A0CM-01A-21-A13C-20 Bid-R-C BID -1.513078867 TCGA-A2-A0CM-01A-21-A13C-20 Bim-R-V BCL2L11 -.773174703 TCGA-A2-A0CM-01A-21-A13C-20 C-Raf-R-V RAF1 -.972782953 TCGA-A2-A0CM-01A-21-A13C-20 C-Raf_pS338-R-C RAF1 -1.48298678 TCGA-A2-A0CM-01A-21-A13C-20 CD31-M-V PECAM1 -.82767613 TCGA-A2-A0CM-01A-21-A13C-20 CD49b-M-V ITGA2 -2.347271956 TCGA-A2-A0CM-01A-21-A13C-20 CDK1-R-V CDC2 -.961544099 TCGA-A2-A0CM-01A-21-A13C-20 COX-2-R-C PTGS2 -.077948717 TCGA-A2-A0CM-01A-21-A13C-20 Caspase-7_cleavedD198-R-C CASP7 1.521065163 TCGA-A2-A0CM-01A-21-A13C-20 Caspase-8-M-C CASP8 -1.167076212 TCGA-A2-A0CM-01A-21-A13C-20 Caspase-9_cleavedD330-R-C CASP9 -.456433742 TCGA-A2-A0CM-01A-21-A13C-20 Caveolin-1-R-V CAV1 .188111826 TCGA-A2-A0CM-01A-21-A13C-20 Chk1-R-V CHEK1 .169160704 TCGA-A2-A0CM-01A-21-A13C-20 Chk1_pS345-R-C CHEK1 -.316234717 TCGA-A2-A0CM-01A-21-A13C-20 Chk2-M-C CHEK2 -1.120566139 TCGA-A2-A0CM-01A-21-A13C-20 Chk2_pT68-R-C CHEK2 -1.598362033 TCGA-A2-A0CM-01A-21-A13C-20 Claudin-7-R-V CLDN7 1.943514452 TCGA-A2-A0CM-01A-21-A13C-20 Collagen_VI-R-V COL6A1 1.137607261 TCGA-A2-A0CM-01A-21-A13C-20 Cyclin_B1-R-V CCNB1 .637071262 TCGA-A2-A0CM-01A-21-A13C-20 Cyclin_D1-R-V CCND1 -.723683509 TCGA-A2-A0CM-01A-21-A13C-20 Cyclin_E1-M-V CCNE1 -1.189196013 TCGA-A2-A0CM-01A-21-A13C-20 DJ-1-R-C PARK7 .471862217 TCGA-A2-A0CM-01A-21-A13C-20 Dvl3-R-V DVL3 -.869594227 TCGA-A2-A0CM-01A-21-A13C-20 E-Cadherin-R-V CDH1 .815985876 TCGA-A2-A0CM-01A-21-A13C-20 EGFR-R-C EGFR -2.051642923 TCGA-A2-A0CM-01A-21-A13C-20 EGFR_pY1068-R-V EGFR -4.968814618 TCGA-A2-A0CM-01A-21-A13C-20 EGFR_pY1173-R-C EGFR -1.716336356 TCGA-A2-A0CM-01A-21-A13C-20 EGFR_pY992-R-V EGFR -1.169038073 TCGA-A2-A0CM-01A-21-A13C-20 ER-alpha-R-V ESR1 -2.187164146 TCGA-A2-A0CM-01A-21-A13C-20 ER-alpha_pS118-R-V ESR1 .00235739800000012 TCGA-A2-A0CM-01A-21-A13C-20 ERCC1-M-C ERCC1 .750164431 TCGA-A2-A0CM-01A-21-A13C-20 ERK2-R-NA MAPK1 3.422834464 TCGA-A2-A0CM-01A-21-A13C-20 FAK-R-C PTK2 2.330769868 TCGA-A2-A0CM-01A-21-A13C-20 FOXO3a-R-C FOXO3 -.659197928 TCGA-A2-A0CM-01A-21-A13C-20 FOXO3a_pS318_S321-R-C FOXO3 .788271334 TCGA-A2-A0CM-01A-21-A13C-20 Fibronectin-R-C FN1 5.693787054 TCGA-A2-A0CM-01A-21-A13C-20 GAB2-R-V GAB2 .077054798 TCGA-A2-A0CM-01A-21-A13C-20 GATA3-M-V GATA3 -1.223468495 TCGA-A2-A0CM-01A-21-A13C-20 GSK3-alpha-beta-M-V GSK3A GSK3B 2.987496349 TCGA-A2-A0CM-01A-21-A13C-20 GSK3-alpha-beta_pS21_S9-R-V GSK3A GSK3B 1.594532709 TCGA-A2-A0CM-01A-21-A13C-20 HER2-M-V ERBB2 -.0287131199999999 TCGA-A2-A0CM-01A-21-A13C-20 HER2_pY1248-R-V ERBB2 -1.883087836 TCGA-A2-A0CM-01A-21-A13C-20 HER3-M-C ERBB3 1.021411984 TCGA-A2-A0CM-01A-21-A13C-20 HER3_pY1298-R-V ERBB3 4.3896276 TCGA-A2-A0CM-01A-21-A13C-20 HSP70-R-C HSPA1A 1.436858958 TCGA-A2-A0CM-01A-21-A13C-20 IGF-1R-beta-R-C IGF1R .270417472 TCGA-A2-A0CM-01A-21-A13C-20 IGFBP2-R-V IGFBP2 -2.709619893 TCGA-A2-A0CM-01A-21-A13C-20 INPP4B-G-C INPP4B 1.227314993 TCGA-A2-A0CM-01A-21-A13C-20 IRS1-R-V IRS1 .538503265 TCGA-A2-A0CM-01A-21-A13C-20 JNK2-R-C MAPK9 -1.420362272 TCGA-A2-A0CM-01A-21-A13C-20 K-Ras-M-C KRAS -.435287439 TCGA-A2-A0CM-01A-21-A13C-20 Ku80-R-C XRCC5 1.397687378 TCGA-A2-A0CM-01A-21-A13C-20 LBK1-M-NA STK11 .784510966 TCGA-A2-A0CM-01A-21-A13C-20 Lck-R-V LCK -1.495260569 TCGA-A2-A0CM-01A-21-A13C-20 MAPK_pT202_Y204-R-V MAPK1 MAPK3 2.181038413 TCGA-A2-A0CM-01A-21-A13C-20 MEK1-R-V MAP2K1 .559421758 TCGA-A2-A0CM-01A-21-A13C-20 MEK1_pS217_S221-R-V MAP2K1 1.165688881 TCGA-A2-A0CM-01A-21-A13C-20 MIG-6-M-V ERRFI1 -.601347903 TCGA-A2-A0CM-01A-21-A13C-20 MSH2-M-C MSH2 -.164867261 TCGA-A2-A0CM-01A-21-A13C-20 MSH6-R-C MSH6 2.087416247 TCGA-A2-A0CM-01A-21-A13C-20 Mre11-R-C MRE11A .408255374 TCGA-A2-A0CM-01A-21-A13C-20 N-Cadherin-R-V CDH2 -2.065631867 TCGA-A2-A0CM-01A-21-A13C-20 NF-kB-p65_pS536-R-C NFKB1 -.803047975 TCGA-A2-A0CM-01A-21-A13C-20 NF2-R-C NF2 -.000930435999999979 TCGA-A2-A0CM-01A-21-A13C-20 Notch1-R-V NOTCH1 -1.930331749 TCGA-A2-A0CM-01A-21-A13C-20 Notch3-R-C NOTCH3 -.00591266999999995 TCGA-A2-A0CM-01A-21-A13C-20 P-Cadherin-R-C CDH3 -1.403230317 TCGA-A2-A0CM-01A-21-A13C-20 PARP_cleaved-M-C PARP1 -2.009080034 TCGA-A2-A0CM-01A-21-A13C-20 PCNA-M-V PCNA -1.95024232 TCGA-A2-A0CM-01A-21-A13C-20 PDK1_pS241-R-V PDK1 -.181492787 TCGA-A2-A0CM-01A-21-A13C-20 PI3K-p110-alpha-R-C PIK3CA -2.390147189 TCGA-A2-A0CM-01A-21-A13C-20 PKC-alpha-M-V PRKCA 1.220039562 TCGA-A2-A0CM-01A-21-A13C-20 PKC-alpha_pS657-R-V PRKCA -1.287274451 TCGA-A2-A0CM-01A-21-A13C-20 PKC-delta_pS664-R-V PRKCD -1.060209215 TCGA-A2-A0CM-01A-21-A13C-20 PR-R-V PGR -4.276528741 TCGA-A2-A0CM-01A-21-A13C-20 PRAS40_pT246-R-V AKT1S1 -1.164526543 TCGA-A2-A0CM-01A-21-A13C-20 PRDX1-R-NA PRDX1 -1.685152614 TCGA-A2-A0CM-01A-21-A13C-20 PTCH-R-C PTCH1 2.508122067 TCGA-A2-A0CM-01A-21-A13C-20 PTEN-R-V PTEN .049043896 TCGA-A2-A0CM-01A-21-A13C-20 Paxillin-R-V PXN -.486656387 TCGA-A2-A0CM-01A-21-A13C-20 Pea-15-R-V PEA15 -.103547886 TCGA-A2-A0CM-01A-21-A13C-20 RBM3-M-NA RBM3 .745619915 TCGA-A2-A0CM-01A-21-A13C-20 Rab25-R-C RAB25 -2.059338479 TCGA-A2-A0CM-01A-21-A13C-20 Rad50-M-C RAD50 -.065166757 TCGA-A2-A0CM-01A-21-A13C-20 Rad51-M-C RAD51 -1.008141487 TCGA-A2-A0CM-01A-21-A13C-20 Rb-M-V RB1 -1.223087046 TCGA-A2-A0CM-01A-21-A13C-20 Rb_pS807_S811-R-V RB1 -1.452619284 TCGA-A2-A0CM-01A-21-A13C-20 S6-R-NA RPS6 .203805897 TCGA-A2-A0CM-01A-21-A13C-20 S6_pS235_S236-R-V RPS6 -1.830022231 TCGA-A2-A0CM-01A-21-A13C-20 S6_pS240_S244-R-V RPS6 -1.058841437 TCGA-A2-A0CM-01A-21-A13C-20 SETD2-R-NA SETD2 -.832519775 TCGA-A2-A0CM-01A-21-A13C-20 STAT3_pY705-R-V STAT3 -1.648709748 TCGA-A2-A0CM-01A-21-A13C-20 STAT5-alpha-R-V STAT5A .966384056 TCGA-A2-A0CM-01A-21-A13C-20 Shc_pY317-R-NA SHC1 -3.628309222 TCGA-A2-A0CM-01A-21-A13C-20 Smac-M-V DIABLO -.510602117 TCGA-A2-A0CM-01A-21-A13C-20 Smad1-R-V SMAD1 -.00706467599999994 TCGA-A2-A0CM-01A-21-A13C-20 Smad3-R-V SMAD3 -1.633615822 TCGA-A2-A0CM-01A-21-A13C-20 Smad4-M-C SMAD4 -.252663562 TCGA-A2-A0CM-01A-21-A13C-20 Snail-M-C SNAI2 -.773488283 TCGA-A2-A0CM-01A-21-A13C-20 Src-M-V SRC -.908728004 TCGA-A2-A0CM-01A-21-A13C-20 Src_pY416-R-C SRC -2.640965486 TCGA-A2-A0CM-01A-21-A13C-20 Src_pY527-R-V SRC -2.590631461 TCGA-A2-A0CM-01A-21-A13C-20 Stathmin-R-V STMN1 -.961530141 TCGA-A2-A0CM-01A-21-A13C-20 Syk-M-V SYK .108222168 TCGA-A2-A0CM-01A-21-A13C-20 TAZ_pS89-R-C WWTR1 .601286577 TCGA-A2-A0CM-01A-21-A13C-20 Tau-M-C MAPT -1.60504962 TCGA-A2-A0CM-01A-21-A13C-20 Transglutaminase-M-V TGM2 1.604078454 TCGA-A2-A0CM-01A-21-A13C-20 Tuberin-R-C TSC2 .092720363 TCGA-A2-A0CM-01A-21-A13C-20 VASP-R-C VASP .116094402 TCGA-A2-A0CM-01A-21-A13C-20 VEGFR2-R-C KDR 3.804062276 TCGA-A2-A0CM-01A-21-A13C-20 XBP1-G-C XBP1 .80313469 TCGA-A2-A0CM-01A-21-A13C-20 XIAP-R-C XIAP -1.407079501 TCGA-A2-A0CM-01A-21-A13C-20 XRCC1-R-C XRCC1 -1.058969274 TCGA-A2-A0CM-01A-21-A13C-20 YAP-R-V YAP1 .667986276 TCGA-A2-A0CM-01A-21-A13C-20 YAP_pS127-R-C YAP1 .693788031 TCGA-A2-A0CM-01A-21-A13C-20 YB-1-R-V YBX1 1.330141965 TCGA-A2-A0CM-01A-21-A13C-20 YB-1_pS102-R-V YBX1 -1.070780557 TCGA-A2-A0CM-01A-21-A13C-20 alpha-Catenin-M-V CTNNA1 -.352018705 TCGA-A2-A0CM-01A-21-A13C-20 beta-Catenin-R-V CTNNB1 2.050682436 TCGA-A2-A0CM-01A-21-A13C-20 c-Jun_pS73-R-C JUN -1.762463771 TCGA-A2-A0CM-01A-21-A13C-20 c-Kit-R-V KIT .170861274 TCGA-A2-A0CM-01A-21-A13C-20 c-Met-M-C MET .227394193 TCGA-A2-A0CM-01A-21-A13C-20 c-Met_pY1235-R-C MET -.751074126 TCGA-A2-A0CM-01A-21-A13C-20 c-Myc-R-C MYC .150937505 TCGA-A2-A0CM-01A-21-A13C-20 cIAP-R-V BIRC2 .598958055 TCGA-A2-A0CM-01A-21-A13C-20 eEF2-R-V EEF2 -2.247581089 TCGA-A2-A0CM-01A-21-A13C-20 eEF2K-R-V EEF2K -1.477848691 TCGA-A2-A0CM-01A-21-A13C-20 eIF4E-R-V EIF4E -.167423603 TCGA-A2-A0CM-01A-21-A13C-20 mTOR-R-V FRAP1 2.283253944 TCGA-A2-A0CM-01A-21-A13C-20 p21-R-C CDKN1A -.504109588 TCGA-A2-A0CM-01A-21-A13C-20 p27-R-V CDKN1B -1.26992449 TCGA-A2-A0CM-01A-21-A13C-20 p27_pT157-R-C CDKN1B -1.329537826 TCGA-A2-A0CM-01A-21-A13C-20 p27_pT198-R-V CDKN1B -1.734366438 TCGA-A2-A0CM-01A-21-A13C-20 p38_MAPK-R-C MAPK14 -1.437718272 TCGA-A2-A0CM-01A-21-A13C-20 p38_pT180_Y182-R-V MAPK14 -.18673276 TCGA-A2-A0CM-01A-21-A13C-20 p53-R-V TP53 -2.898564917 TCGA-A2-A0CM-01A-21-A13C-20 p70S6K-R-V RPS6KB1 -.0276942189999999 TCGA-A2-A0CM-01A-21-A13C-20 p70S6K_pT389-R-V RPS6KB1 -2.740468381 TCGA-A2-A0CM-01A-21-A13C-20 p90RSK_pT359_S363-R-C RPS6KA1 -.683439762