barcode antibody name gene name protein expression value TCGA-A2-A0CL-01A-21-A13C-20 14-3-3_epsilon-M-C YWHAE -1.48024327 TCGA-A2-A0CL-01A-21-A13C-20 4E-BP1-R-V EIF4EBP1 -1.409476404 TCGA-A2-A0CL-01A-21-A13C-20 4E-BP1_pS65-R-V EIF4EBP1 -1.989608118 TCGA-A2-A0CL-01A-21-A13C-20 4E-BP1_pT170-R-V EIF4EBP1 -2.074635511 TCGA-A2-A0CL-01A-21-A13C-20 4E-BP1_pT37-R-V EIF4EBP1 -.840335847 TCGA-A2-A0CL-01A-21-A13C-20 53BP1-R-C TP53BP1 .528157928 TCGA-A2-A0CL-01A-21-A13C-20 A-Raf_pS299-R-NA ARAF -2.13575734 TCGA-A2-A0CL-01A-21-A13C-20 ACC1-R-C ACACA -.0515810020000001 TCGA-A2-A0CL-01A-21-A13C-20 ACC_pS79-R-V ACACA ACACB -.236958582 TCGA-A2-A0CL-01A-21-A13C-20 AIB1-M-V NCOA3 -1.262775463 TCGA-A2-A0CL-01A-21-A13C-20 AMPK_alpha-R-C PRKAA1 -.2222601 TCGA-A2-A0CL-01A-21-A13C-20 AMPK_pT172-R-V PRKAA1 .8263087 TCGA-A2-A0CL-01A-21-A13C-20 ANLN-M-NA ANLN .329560982 TCGA-A2-A0CL-01A-21-A13C-20 AR-R-V AR -.158924711 TCGA-A2-A0CL-01A-21-A13C-20 ATM-R-NA ATM 2.081861838 TCGA-A2-A0CL-01A-21-A13C-20 Akt-R-V AKT1 AKT2 AKT3 .635321012 TCGA-A2-A0CL-01A-21-A13C-20 Akt_pS473-R-V AKT1 AKT2 AKT3 -3.083189933 TCGA-A2-A0CL-01A-21-A13C-20 Akt_pT308-R-V AKT1 AKT2 AKT3 -2.090249549 TCGA-A2-A0CL-01A-21-A13C-20 Annexin_I-R-V ANXA1 2.508798609 TCGA-A2-A0CL-01A-21-A13C-20 B-Raf-M-NA BRAF 1.278648759 TCGA-A2-A0CL-01A-21-A13C-20 Bak-R-C BAK1 .256102001 TCGA-A2-A0CL-01A-21-A13C-20 Bax-R-V BAX -.0179953110000001 TCGA-A2-A0CL-01A-21-A13C-20 Bcl-2-M-V BCL2 -.57901732 TCGA-A2-A0CL-01A-21-A13C-20 Bcl-X-R-C BCL2L1 -1.118237794 TCGA-A2-A0CL-01A-21-A13C-20 Bcl-xL-R-C BCL2L1 -1.482338884 TCGA-A2-A0CL-01A-21-A13C-20 Beclin-G-V BECN1 .637229287 TCGA-A2-A0CL-01A-21-A13C-20 Bid-R-C BID -1.510960452 TCGA-A2-A0CL-01A-21-A13C-20 Bim-R-V BCL2L11 -1.071803512 TCGA-A2-A0CL-01A-21-A13C-20 C-Raf-R-V RAF1 -1.083415113 TCGA-A2-A0CL-01A-21-A13C-20 C-Raf_pS338-R-C RAF1 -1.468397633 TCGA-A2-A0CL-01A-21-A13C-20 CD31-M-V PECAM1 -.686826714 TCGA-A2-A0CL-01A-21-A13C-20 CD49b-M-V ITGA2 -1.966747657 TCGA-A2-A0CL-01A-21-A13C-20 CDK1-R-V CDC2 -.75837881 TCGA-A2-A0CL-01A-21-A13C-20 COX-2-R-C PTGS2 -.184905536 TCGA-A2-A0CL-01A-21-A13C-20 Caspase-7_cleavedD198-R-C CASP7 1.270049001 TCGA-A2-A0CL-01A-21-A13C-20 Caspase-8-M-C CASP8 -.867173411 TCGA-A2-A0CL-01A-21-A13C-20 Caspase-9_cleavedD330-R-C CASP9 -.125220917 TCGA-A2-A0CL-01A-21-A13C-20 Caveolin-1-R-V CAV1 2.138876676 TCGA-A2-A0CL-01A-21-A13C-20 Chk1-R-V CHEK1 .334434652 TCGA-A2-A0CL-01A-21-A13C-20 Chk1_pS345-R-C CHEK1 -.305679654 TCGA-A2-A0CL-01A-21-A13C-20 Chk2-M-C CHEK2 -.665733264 TCGA-A2-A0CL-01A-21-A13C-20 Chk2_pT68-R-C CHEK2 -1.588566572 TCGA-A2-A0CL-01A-21-A13C-20 Claudin-7-R-V CLDN7 -.410281495 TCGA-A2-A0CL-01A-21-A13C-20 Collagen_VI-R-V COL6A1 1.769003373 TCGA-A2-A0CL-01A-21-A13C-20 Cyclin_B1-R-V CCNB1 -.991324342 TCGA-A2-A0CL-01A-21-A13C-20 Cyclin_D1-R-V CCND1 -.645217535 TCGA-A2-A0CL-01A-21-A13C-20 Cyclin_E1-M-V CCNE1 -2.276292296 TCGA-A2-A0CL-01A-21-A13C-20 DJ-1-R-C PARK7 .478743614 TCGA-A2-A0CL-01A-21-A13C-20 Dvl3-R-V DVL3 -1.307224079 TCGA-A2-A0CL-01A-21-A13C-20 E-Cadherin-R-V CDH1 -.136113323 TCGA-A2-A0CL-01A-21-A13C-20 EGFR-R-C EGFR -1.784358121 TCGA-A2-A0CL-01A-21-A13C-20 EGFR_pY1068-R-V EGFR -4.400066887 TCGA-A2-A0CL-01A-21-A13C-20 EGFR_pY1173-R-C EGFR -1.631608228 TCGA-A2-A0CL-01A-21-A13C-20 EGFR_pY992-R-V EGFR -1.066395099 TCGA-A2-A0CL-01A-21-A13C-20 ER-alpha-R-V ESR1 -.576417211 TCGA-A2-A0CL-01A-21-A13C-20 ER-alpha_pS118-R-V ESR1 -.165966869 TCGA-A2-A0CL-01A-21-A13C-20 ERCC1-M-C ERCC1 .560469986 TCGA-A2-A0CL-01A-21-A13C-20 ERK2-R-NA MAPK1 3.493984106 TCGA-A2-A0CL-01A-21-A13C-20 FAK-R-C PTK2 1.972539037 TCGA-A2-A0CL-01A-21-A13C-20 FOXO3a-R-C FOXO3 -.412004327 TCGA-A2-A0CL-01A-21-A13C-20 FOXO3a_pS318_S321-R-C FOXO3 .571932469 TCGA-A2-A0CL-01A-21-A13C-20 Fibronectin-R-C FN1 5.690160041 TCGA-A2-A0CL-01A-21-A13C-20 GAB2-R-V GAB2 .593340032 TCGA-A2-A0CL-01A-21-A13C-20 GATA3-M-V GATA3 .547955819 TCGA-A2-A0CL-01A-21-A13C-20 GSK3-alpha-beta-M-V GSK3A GSK3B 2.101963622 TCGA-A2-A0CL-01A-21-A13C-20 GSK3-alpha-beta_pS21_S9-R-V GSK3A GSK3B 1.490390393 TCGA-A2-A0CL-01A-21-A13C-20 HER2-M-V ERBB2 -.459311096 TCGA-A2-A0CL-01A-21-A13C-20 HER2_pY1248-R-V ERBB2 -1.693899404 TCGA-A2-A0CL-01A-21-A13C-20 HER3-M-C ERBB3 .344439269 TCGA-A2-A0CL-01A-21-A13C-20 HER3_pY1298-R-V ERBB3 4.74240581 TCGA-A2-A0CL-01A-21-A13C-20 HSP70-R-C HSPA1A 2.003422528 TCGA-A2-A0CL-01A-21-A13C-20 IGF-1R-beta-R-C IGF1R -.955139058 TCGA-A2-A0CL-01A-21-A13C-20 IGFBP2-R-V IGFBP2 .365552509 TCGA-A2-A0CL-01A-21-A13C-20 INPP4B-G-C INPP4B 1.202396861 TCGA-A2-A0CL-01A-21-A13C-20 IRS1-R-V IRS1 .380482067 TCGA-A2-A0CL-01A-21-A13C-20 JNK2-R-C MAPK9 -.939382224 TCGA-A2-A0CL-01A-21-A13C-20 K-Ras-M-C KRAS -.217625999 TCGA-A2-A0CL-01A-21-A13C-20 Ku80-R-C XRCC5 1.351376596 TCGA-A2-A0CL-01A-21-A13C-20 LBK1-M-NA STK11 .87496801 TCGA-A2-A0CL-01A-21-A13C-20 Lck-R-V LCK .163020319 TCGA-A2-A0CL-01A-21-A13C-20 MAPK_pT202_Y204-R-V MAPK1 MAPK3 .0734163069999999 TCGA-A2-A0CL-01A-21-A13C-20 MEK1-R-V MAP2K1 1.152308533 TCGA-A2-A0CL-01A-21-A13C-20 MEK1_pS217_S221-R-V MAP2K1 .937200308 TCGA-A2-A0CL-01A-21-A13C-20 MIG-6-M-V ERRFI1 -.672939721 TCGA-A2-A0CL-01A-21-A13C-20 MSH2-M-C MSH2 -.538410393 TCGA-A2-A0CL-01A-21-A13C-20 MSH6-R-C MSH6 1.327467853 TCGA-A2-A0CL-01A-21-A13C-20 Mre11-R-C MRE11A .496432675 TCGA-A2-A0CL-01A-21-A13C-20 N-Cadherin-R-V CDH2 -1.774245777 TCGA-A2-A0CL-01A-21-A13C-20 NF-kB-p65_pS536-R-C NFKB1 -.620513342 TCGA-A2-A0CL-01A-21-A13C-20 NF2-R-C NF2 -.0260547790000001 TCGA-A2-A0CL-01A-21-A13C-20 Notch1-R-V NOTCH1 -2.513345234 TCGA-A2-A0CL-01A-21-A13C-20 Notch3-R-C NOTCH3 .561427234 TCGA-A2-A0CL-01A-21-A13C-20 P-Cadherin-R-C CDH3 -1.313486431 TCGA-A2-A0CL-01A-21-A13C-20 PARP_cleaved-M-C PARP1 -1.986491649 TCGA-A2-A0CL-01A-21-A13C-20 PCNA-M-V PCNA -1.10684672 TCGA-A2-A0CL-01A-21-A13C-20 PDK1_pS241-R-V PDK1 -.00942220600000014 TCGA-A2-A0CL-01A-21-A13C-20 PI3K-p110-alpha-R-C PIK3CA -2.318065048 TCGA-A2-A0CL-01A-21-A13C-20 PKC-alpha-M-V PRKCA 1.08378771 TCGA-A2-A0CL-01A-21-A13C-20 PKC-alpha_pS657-R-V PRKCA -.716381977 TCGA-A2-A0CL-01A-21-A13C-20 PKC-delta_pS664-R-V PRKCD -.574318233 TCGA-A2-A0CL-01A-21-A13C-20 PR-R-V PGR -3.528944754 TCGA-A2-A0CL-01A-21-A13C-20 PRAS40_pT246-R-V AKT1S1 -1.034100325 TCGA-A2-A0CL-01A-21-A13C-20 PRDX1-R-NA PRDX1 -1.80219123 TCGA-A2-A0CL-01A-21-A13C-20 PTCH-R-C PTCH1 .596945163 TCGA-A2-A0CL-01A-21-A13C-20 PTEN-R-V PTEN -.329719793 TCGA-A2-A0CL-01A-21-A13C-20 Paxillin-R-V PXN -.145486366 TCGA-A2-A0CL-01A-21-A13C-20 Pea-15-R-V PEA15 -.375939757 TCGA-A2-A0CL-01A-21-A13C-20 RBM3-M-NA RBM3 .832352287 TCGA-A2-A0CL-01A-21-A13C-20 Rab25-R-C RAB25 -2.308915064 TCGA-A2-A0CL-01A-21-A13C-20 Rad50-M-C RAD50 .25084407 TCGA-A2-A0CL-01A-21-A13C-20 Rad51-M-C RAD51 -1.060217959 TCGA-A2-A0CL-01A-21-A13C-20 Rb-M-V RB1 -.919673934 TCGA-A2-A0CL-01A-21-A13C-20 Rb_pS807_S811-R-V RB1 -1.420592177 TCGA-A2-A0CL-01A-21-A13C-20 S6-R-NA RPS6 .156058006 TCGA-A2-A0CL-01A-21-A13C-20 S6_pS235_S236-R-V RPS6 -1.231249769 TCGA-A2-A0CL-01A-21-A13C-20 S6_pS240_S244-R-V RPS6 -.277740345 TCGA-A2-A0CL-01A-21-A13C-20 SETD2-R-NA SETD2 -.716258315 TCGA-A2-A0CL-01A-21-A13C-20 STAT3_pY705-R-V STAT3 -1.477324438 TCGA-A2-A0CL-01A-21-A13C-20 STAT5-alpha-R-V STAT5A 1.544494866 TCGA-A2-A0CL-01A-21-A13C-20 Shc_pY317-R-NA SHC1 -3.587473168 TCGA-A2-A0CL-01A-21-A13C-20 Smac-M-V DIABLO -.688856543 TCGA-A2-A0CL-01A-21-A13C-20 Smad1-R-V SMAD1 -.0144506780000001 TCGA-A2-A0CL-01A-21-A13C-20 Smad3-R-V SMAD3 -1.353419762 TCGA-A2-A0CL-01A-21-A13C-20 Smad4-M-C SMAD4 -.281016864 TCGA-A2-A0CL-01A-21-A13C-20 Snail-M-C SNAI2 -1.863024702 TCGA-A2-A0CL-01A-21-A13C-20 Src-M-V SRC -.726813461 TCGA-A2-A0CL-01A-21-A13C-20 Src_pY416-R-C SRC -2.112891059 TCGA-A2-A0CL-01A-21-A13C-20 Src_pY527-R-V SRC -2.206829937 TCGA-A2-A0CL-01A-21-A13C-20 Stathmin-R-V STMN1 -.8507229 TCGA-A2-A0CL-01A-21-A13C-20 Syk-M-V SYK 1.393186399 TCGA-A2-A0CL-01A-21-A13C-20 TAZ_pS89-R-C WWTR1 .553736289 TCGA-A2-A0CL-01A-21-A13C-20 Tau-M-C MAPT -1.276021416 TCGA-A2-A0CL-01A-21-A13C-20 Transglutaminase-M-V TGM2 1.19472303 TCGA-A2-A0CL-01A-21-A13C-20 Tuberin-R-C TSC2 -.21670383 TCGA-A2-A0CL-01A-21-A13C-20 VASP-R-C VASP .252021638 TCGA-A2-A0CL-01A-21-A13C-20 VEGFR2-R-C KDR 1.780472162 TCGA-A2-A0CL-01A-21-A13C-20 XBP1-G-C XBP1 .347135153 TCGA-A2-A0CL-01A-21-A13C-20 XIAP-R-C XIAP -1.300472525 TCGA-A2-A0CL-01A-21-A13C-20 XRCC1-R-C XRCC1 -.932506959 TCGA-A2-A0CL-01A-21-A13C-20 YAP-R-V YAP1 .67814463 TCGA-A2-A0CL-01A-21-A13C-20 YAP_pS127-R-C YAP1 .438241952 TCGA-A2-A0CL-01A-21-A13C-20 YB-1-R-V YBX1 .550725146 TCGA-A2-A0CL-01A-21-A13C-20 YB-1_pS102-R-V YBX1 -1.336341134 TCGA-A2-A0CL-01A-21-A13C-20 alpha-Catenin-M-V CTNNA1 -.447191428 TCGA-A2-A0CL-01A-21-A13C-20 beta-Catenin-R-V CTNNB1 .739683286 TCGA-A2-A0CL-01A-21-A13C-20 c-Jun_pS73-R-C JUN -2.059366021 TCGA-A2-A0CL-01A-21-A13C-20 c-Kit-R-V KIT -1.559404415 TCGA-A2-A0CL-01A-21-A13C-20 c-Met-M-C MET .0620781249999999 TCGA-A2-A0CL-01A-21-A13C-20 c-Met_pY1235-R-C MET -.838939872 TCGA-A2-A0CL-01A-21-A13C-20 c-Myc-R-C MYC -.810752822 TCGA-A2-A0CL-01A-21-A13C-20 cIAP-R-V BIRC2 .632127038 TCGA-A2-A0CL-01A-21-A13C-20 eEF2-R-V EEF2 -2.159498271 TCGA-A2-A0CL-01A-21-A13C-20 eEF2K-R-V EEF2K -1.198076194 TCGA-A2-A0CL-01A-21-A13C-20 eIF4E-R-V EIF4E -.155356261 TCGA-A2-A0CL-01A-21-A13C-20 mTOR-R-V FRAP1 2.089883997 TCGA-A2-A0CL-01A-21-A13C-20 p21-R-C CDKN1A -.955303759 TCGA-A2-A0CL-01A-21-A13C-20 p27-R-V CDKN1B -.587564499 TCGA-A2-A0CL-01A-21-A13C-20 p27_pT157-R-C CDKN1B -1.217519362 TCGA-A2-A0CL-01A-21-A13C-20 p27_pT198-R-V CDKN1B -1.788238934 TCGA-A2-A0CL-01A-21-A13C-20 p38_MAPK-R-C MAPK14 -.998072982 TCGA-A2-A0CL-01A-21-A13C-20 p38_pT180_Y182-R-V MAPK14 -.224098476 TCGA-A2-A0CL-01A-21-A13C-20 p53-R-V TP53 -3.092498917 TCGA-A2-A0CL-01A-21-A13C-20 p70S6K-R-V RPS6KB1 .491449797 TCGA-A2-A0CL-01A-21-A13C-20 p70S6K_pT389-R-V RPS6KB1 -2.297348532 TCGA-A2-A0CL-01A-21-A13C-20 p90RSK_pT359_S363-R-C RPS6KA1 -.663972726