barcode antibody name gene name protein expression value TCGA-A1-A0SO-01A-11-A13A-20 14-3-3_epsilon-M-C YWHAE -1.590481983 TCGA-A1-A0SO-01A-11-A13A-20 4E-BP1-R-V EIF4EBP1 -.686705877 TCGA-A1-A0SO-01A-11-A13A-20 4E-BP1_pS65-R-V EIF4EBP1 -1.73568134 TCGA-A1-A0SO-01A-11-A13A-20 4E-BP1_pT170-R-V EIF4EBP1 -1.520425689 TCGA-A1-A0SO-01A-11-A13A-20 4E-BP1_pT37-R-V EIF4EBP1 -.0895419759999997 TCGA-A1-A0SO-01A-11-A13A-20 53BP1-R-C TP53BP1 .645350069 TCGA-A1-A0SO-01A-11-A13A-20 A-Raf_pS299-R-NA ARAF -2.108418976 TCGA-A1-A0SO-01A-11-A13A-20 ACC1-R-C ACACA .653757372 TCGA-A1-A0SO-01A-11-A13A-20 ACC_pS79-R-V ACACA ACACB .304184906 TCGA-A1-A0SO-01A-11-A13A-20 AIB1-M-V NCOA3 -1.420204267 TCGA-A1-A0SO-01A-11-A13A-20 AMPK_alpha-R-C PRKAA1 .200496757 TCGA-A1-A0SO-01A-11-A13A-20 AMPK_pT172-R-V PRKAA1 .00513230600000032 TCGA-A1-A0SO-01A-11-A13A-20 ANLN-M-NA ANLN .364248951 TCGA-A1-A0SO-01A-11-A13A-20 AR-R-V AR -2.042925836 TCGA-A1-A0SO-01A-11-A13A-20 ATM-R-NA ATM 1.434124186 TCGA-A1-A0SO-01A-11-A13A-20 Akt-R-V AKT1 AKT2 AKT3 1.26458041 TCGA-A1-A0SO-01A-11-A13A-20 Akt_pS473-R-V AKT1 AKT2 AKT3 -3.287370628 TCGA-A1-A0SO-01A-11-A13A-20 Akt_pT308-R-V AKT1 AKT2 AKT3 -1.749121125 TCGA-A1-A0SO-01A-11-A13A-20 Annexin_I-R-V ANXA1 2.824491487 TCGA-A1-A0SO-01A-11-A13A-20 B-Raf-M-NA BRAF 1.18871963 TCGA-A1-A0SO-01A-11-A13A-20 Bak-R-C BAK1 .174145215 TCGA-A1-A0SO-01A-11-A13A-20 Bax-R-V BAX -.0636239109999997 TCGA-A1-A0SO-01A-11-A13A-20 Bcl-2-M-V BCL2 -2.182888831 TCGA-A1-A0SO-01A-11-A13A-20 Bcl-X-R-C BCL2L1 -1.238213828 TCGA-A1-A0SO-01A-11-A13A-20 Bcl-xL-R-C BCL2L1 -1.378150306 TCGA-A1-A0SO-01A-11-A13A-20 Beclin-G-V BECN1 .240000967 TCGA-A1-A0SO-01A-11-A13A-20 Bid-R-C BID -1.470210197 TCGA-A1-A0SO-01A-11-A13A-20 Bim-R-V BCL2L11 -1.512914461 TCGA-A1-A0SO-01A-11-A13A-20 C-Raf-R-V RAF1 -.468599002 TCGA-A1-A0SO-01A-11-A13A-20 C-Raf_pS338-R-C RAF1 -1.589676608 TCGA-A1-A0SO-01A-11-A13A-20 CD31-M-V PECAM1 -1.272032204 TCGA-A1-A0SO-01A-11-A13A-20 CD49b-M-V ITGA2 -1.537282202 TCGA-A1-A0SO-01A-11-A13A-20 CDK1-R-V CDC2 -1.505424868 TCGA-A1-A0SO-01A-11-A13A-20 COX-2-R-C PTGS2 .241784281 TCGA-A1-A0SO-01A-11-A13A-20 Caspase-7_cleavedD198-R-C CASP7 .0211483330000003 TCGA-A1-A0SO-01A-11-A13A-20 Caspase-8-M-C CASP8 -.87070033 TCGA-A1-A0SO-01A-11-A13A-20 Caspase-9_cleavedD330-R-C CASP9 -.0786948919999997 TCGA-A1-A0SO-01A-11-A13A-20 Caveolin-1-R-V CAV1 .225312104 TCGA-A1-A0SO-01A-11-A13A-20 Chk1-R-V CHEK1 .218557451 TCGA-A1-A0SO-01A-11-A13A-20 Chk1_pS345-R-C CHEK1 -.351872409 TCGA-A1-A0SO-01A-11-A13A-20 Chk2-M-C CHEK2 -.647654683 TCGA-A1-A0SO-01A-11-A13A-20 Chk2_pT68-R-C CHEK2 -1.830524002 TCGA-A1-A0SO-01A-11-A13A-20 Claudin-7-R-V CLDN7 -.594731333 TCGA-A1-A0SO-01A-11-A13A-20 Collagen_VI-R-V COL6A1 1.11585612 TCGA-A1-A0SO-01A-11-A13A-20 Cyclin_B1-R-V CCNB1 -.267121127 TCGA-A1-A0SO-01A-11-A13A-20 Cyclin_D1-R-V CCND1 -1.043564155 TCGA-A1-A0SO-01A-11-A13A-20 Cyclin_E1-M-V CCNE1 -2.072310498 TCGA-A1-A0SO-01A-11-A13A-20 DJ-1-R-C PARK7 -.0267116079999997 TCGA-A1-A0SO-01A-11-A13A-20 Dvl3-R-V DVL3 -1.043250547 TCGA-A1-A0SO-01A-11-A13A-20 E-Cadherin-R-V CDH1 .55614795 TCGA-A1-A0SO-01A-11-A13A-20 EGFR-R-C EGFR -1.86470263 TCGA-A1-A0SO-01A-11-A13A-20 EGFR_pY1068-R-V EGFR -4.760086218 TCGA-A1-A0SO-01A-11-A13A-20 EGFR_pY1173-R-C EGFR -1.650315671 TCGA-A1-A0SO-01A-11-A13A-20 EGFR_pY992-R-V EGFR -1.414771244 TCGA-A1-A0SO-01A-11-A13A-20 ER-alpha-R-V ESR1 -3.017963638 TCGA-A1-A0SO-01A-11-A13A-20 ER-alpha_pS118-R-V ESR1 -.200070622 TCGA-A1-A0SO-01A-11-A13A-20 ERCC1-M-C ERCC1 .673878568 TCGA-A1-A0SO-01A-11-A13A-20 ERK2-R-NA MAPK1 3.529112354 TCGA-A1-A0SO-01A-11-A13A-20 FAK-R-C PTK2 2.127406952 TCGA-A1-A0SO-01A-11-A13A-20 FOXO3a-R-C FOXO3 -.20153967 TCGA-A1-A0SO-01A-11-A13A-20 FOXO3a_pS318_S321-R-C FOXO3 .742986064 TCGA-A1-A0SO-01A-11-A13A-20 Fibronectin-R-C FN1 6.089640692 TCGA-A1-A0SO-01A-11-A13A-20 GAB2-R-V GAB2 -.290061881 TCGA-A1-A0SO-01A-11-A13A-20 GATA3-M-V GATA3 -1.459425285 TCGA-A1-A0SO-01A-11-A13A-20 GSK3-alpha-beta-M-V GSK3A GSK3B 2.611602559 TCGA-A1-A0SO-01A-11-A13A-20 GSK3-alpha-beta_pS21_S9-R-V GSK3A GSK3B 1.743864331 TCGA-A1-A0SO-01A-11-A13A-20 HER2-M-V ERBB2 .431061977 TCGA-A1-A0SO-01A-11-A13A-20 HER2_pY1248-R-V ERBB2 -1.449725643 TCGA-A1-A0SO-01A-11-A13A-20 HER3-M-C ERBB3 .87187537 TCGA-A1-A0SO-01A-11-A13A-20 HER3_pY1298-R-V ERBB3 4.550925183 TCGA-A1-A0SO-01A-11-A13A-20 HSP70-R-C HSPA1A .23641809 TCGA-A1-A0SO-01A-11-A13A-20 IGF-1R-beta-R-C IGF1R -.672154957 TCGA-A1-A0SO-01A-11-A13A-20 IGFBP2-R-V IGFBP2 .0977908830000003 TCGA-A1-A0SO-01A-11-A13A-20 INPP4B-G-C INPP4B .271383904 TCGA-A1-A0SO-01A-11-A13A-20 IRS1-R-V IRS1 .100726314 TCGA-A1-A0SO-01A-11-A13A-20 JNK2-R-C MAPK9 -.793122195 TCGA-A1-A0SO-01A-11-A13A-20 K-Ras-M-C KRAS -.528951674 TCGA-A1-A0SO-01A-11-A13A-20 Ku80-R-C XRCC5 1.579609937 TCGA-A1-A0SO-01A-11-A13A-20 LBK1-M-NA STK11 .723863737 TCGA-A1-A0SO-01A-11-A13A-20 Lck-R-V LCK -1.097073689 TCGA-A1-A0SO-01A-11-A13A-20 MAPK_pT202_Y204-R-V MAPK1 MAPK3 -.83936301 TCGA-A1-A0SO-01A-11-A13A-20 MEK1-R-V MAP2K1 .771384153 TCGA-A1-A0SO-01A-11-A13A-20 MEK1_pS217_S221-R-V MAP2K1 .819647239 TCGA-A1-A0SO-01A-11-A13A-20 MIG-6-M-V ERRFI1 -.633574851 TCGA-A1-A0SO-01A-11-A13A-20 MSH2-M-C MSH2 .00458432000000032 TCGA-A1-A0SO-01A-11-A13A-20 MSH6-R-C MSH6 2.957765109 TCGA-A1-A0SO-01A-11-A13A-20 Mre11-R-C MRE11A .278121392 TCGA-A1-A0SO-01A-11-A13A-20 N-Cadherin-R-V CDH2 -1.84574715 TCGA-A1-A0SO-01A-11-A13A-20 NF-kB-p65_pS536-R-C NFKB1 -.51574821 TCGA-A1-A0SO-01A-11-A13A-20 NF2-R-C NF2 -.10727605 TCGA-A1-A0SO-01A-11-A13A-20 Notch1-R-V NOTCH1 -2.557043852 TCGA-A1-A0SO-01A-11-A13A-20 Notch3-R-C NOTCH3 .168453411 TCGA-A1-A0SO-01A-11-A13A-20 P-Cadherin-R-C CDH3 -.0347703679999997 TCGA-A1-A0SO-01A-11-A13A-20 PARP_cleaved-M-C PARP1 -2.176070023 TCGA-A1-A0SO-01A-11-A13A-20 PCNA-M-V PCNA -1.288388258 TCGA-A1-A0SO-01A-11-A13A-20 PDK1_pS241-R-V PDK1 .115494017 TCGA-A1-A0SO-01A-11-A13A-20 PI3K-p110-alpha-R-C PIK3CA -2.41425358 TCGA-A1-A0SO-01A-11-A13A-20 PKC-alpha-M-V PRKCA .81002396 TCGA-A1-A0SO-01A-11-A13A-20 PKC-alpha_pS657-R-V PRKCA -1.61638039 TCGA-A1-A0SO-01A-11-A13A-20 PKC-delta_pS664-R-V PRKCD -.777215728 TCGA-A1-A0SO-01A-11-A13A-20 PR-R-V PGR -4.43935043 TCGA-A1-A0SO-01A-11-A13A-20 PRAS40_pT246-R-V AKT1S1 -1.171948787 TCGA-A1-A0SO-01A-11-A13A-20 PRDX1-R-NA PRDX1 -1.343376024 TCGA-A1-A0SO-01A-11-A13A-20 PTCH-R-C PTCH1 .797729214 TCGA-A1-A0SO-01A-11-A13A-20 PTEN-R-V PTEN -.295673137 TCGA-A1-A0SO-01A-11-A13A-20 Paxillin-R-V PXN -.386756158 TCGA-A1-A0SO-01A-11-A13A-20 Pea-15-R-V PEA15 -.229232252 TCGA-A1-A0SO-01A-11-A13A-20 RBM3-M-NA RBM3 1.305325597 TCGA-A1-A0SO-01A-11-A13A-20 Rab25-R-C RAB25 -2.420596493 TCGA-A1-A0SO-01A-11-A13A-20 Rad50-M-C RAD50 -.00346213499999968 TCGA-A1-A0SO-01A-11-A13A-20 Rad51-M-C RAD51 -.848916074 TCGA-A1-A0SO-01A-11-A13A-20 Rb-M-V RB1 -1.230462571 TCGA-A1-A0SO-01A-11-A13A-20 Rb_pS807_S811-R-V RB1 -.837480146 TCGA-A1-A0SO-01A-11-A13A-20 S6-R-NA RPS6 .514471552 TCGA-A1-A0SO-01A-11-A13A-20 S6_pS235_S236-R-V RPS6 -2.408459713 TCGA-A1-A0SO-01A-11-A13A-20 S6_pS240_S244-R-V RPS6 -1.046348279 TCGA-A1-A0SO-01A-11-A13A-20 SETD2-R-NA SETD2 -.765500092 TCGA-A1-A0SO-01A-11-A13A-20 STAT3_pY705-R-V STAT3 -2.272062895 TCGA-A1-A0SO-01A-11-A13A-20 STAT5-alpha-R-V STAT5A .916942859 TCGA-A1-A0SO-01A-11-A13A-20 Shc_pY317-R-NA SHC1 -3.928262734 TCGA-A1-A0SO-01A-11-A13A-20 Smac-M-V DIABLO -1.346463036 TCGA-A1-A0SO-01A-11-A13A-20 Smad1-R-V SMAD1 -.0871112129999997 TCGA-A1-A0SO-01A-11-A13A-20 Smad3-R-V SMAD3 -1.39194556 TCGA-A1-A0SO-01A-11-A13A-20 Smad4-M-C SMAD4 -.277496336 TCGA-A1-A0SO-01A-11-A13A-20 Snail-M-C SNAI2 -2.088110625 TCGA-A1-A0SO-01A-11-A13A-20 Src-M-V SRC -.878108397 TCGA-A1-A0SO-01A-11-A13A-20 Src_pY416-R-C SRC -2.496619257 TCGA-A1-A0SO-01A-11-A13A-20 Src_pY527-R-V SRC -2.514301472 TCGA-A1-A0SO-01A-11-A13A-20 Stathmin-R-V STMN1 -.807787616 TCGA-A1-A0SO-01A-11-A13A-20 Syk-M-V SYK 1.079002617 TCGA-A1-A0SO-01A-11-A13A-20 TAZ_pS89-R-C WWTR1 .491436146 TCGA-A1-A0SO-01A-11-A13A-20 Tau-M-C MAPT -1.120435541 TCGA-A1-A0SO-01A-11-A13A-20 Transglutaminase-M-V TGM2 1.363454306 TCGA-A1-A0SO-01A-11-A13A-20 Tuberin-R-C TSC2 .0260624060000003 TCGA-A1-A0SO-01A-11-A13A-20 VASP-R-C VASP .481538152 TCGA-A1-A0SO-01A-11-A13A-20 VEGFR2-R-C KDR 2.906124933 TCGA-A1-A0SO-01A-11-A13A-20 XBP1-G-C XBP1 .301568394 TCGA-A1-A0SO-01A-11-A13A-20 XIAP-R-C XIAP -1.775313594 TCGA-A1-A0SO-01A-11-A13A-20 XRCC1-R-C XRCC1 -.465209547 TCGA-A1-A0SO-01A-11-A13A-20 YAP-R-V YAP1 .476960795 TCGA-A1-A0SO-01A-11-A13A-20 YAP_pS127-R-C YAP1 .501759234 TCGA-A1-A0SO-01A-11-A13A-20 YB-1-R-V YBX1 .815605513 TCGA-A1-A0SO-01A-11-A13A-20 YB-1_pS102-R-V YBX1 -1.165764165 TCGA-A1-A0SO-01A-11-A13A-20 alpha-Catenin-M-V CTNNA1 -.499997807 TCGA-A1-A0SO-01A-11-A13A-20 beta-Catenin-R-V CTNNB1 1.542491702 TCGA-A1-A0SO-01A-11-A13A-20 c-Jun_pS73-R-C JUN -2.20070802 TCGA-A1-A0SO-01A-11-A13A-20 c-Kit-R-V KIT -.932024259 TCGA-A1-A0SO-01A-11-A13A-20 c-Met-M-C MET .0149968790000003 TCGA-A1-A0SO-01A-11-A13A-20 c-Met_pY1235-R-C MET -.916321061 TCGA-A1-A0SO-01A-11-A13A-20 c-Myc-R-C MYC -.434402948 TCGA-A1-A0SO-01A-11-A13A-20 cIAP-R-V BIRC2 .409494324 TCGA-A1-A0SO-01A-11-A13A-20 eEF2-R-V EEF2 -2.060968505 TCGA-A1-A0SO-01A-11-A13A-20 eEF2K-R-V EEF2K -.70565067 TCGA-A1-A0SO-01A-11-A13A-20 eIF4E-R-V EIF4E -.240707498 TCGA-A1-A0SO-01A-11-A13A-20 mTOR-R-V FRAP1 2.394114975 TCGA-A1-A0SO-01A-11-A13A-20 p21-R-C CDKN1A -.778250665 TCGA-A1-A0SO-01A-11-A13A-20 p27-R-V CDKN1B -.884018981 TCGA-A1-A0SO-01A-11-A13A-20 p27_pT157-R-C CDKN1B -1.298498498 TCGA-A1-A0SO-01A-11-A13A-20 p27_pT198-R-V CDKN1B -1.71119881 TCGA-A1-A0SO-01A-11-A13A-20 p38_MAPK-R-C MAPK14 -1.376159893 TCGA-A1-A0SO-01A-11-A13A-20 p38_pT180_Y182-R-V MAPK14 -.74725013 TCGA-A1-A0SO-01A-11-A13A-20 p53-R-V TP53 -2.718057997 TCGA-A1-A0SO-01A-11-A13A-20 p70S6K-R-V RPS6KB1 .829761175 TCGA-A1-A0SO-01A-11-A13A-20 p70S6K_pT389-R-V RPS6KB1 -2.750517243 TCGA-A1-A0SO-01A-11-A13A-20 p90RSK_pT359_S363-R-C RPS6KA1 -.54600158