barcode antibody name gene name protein expression value TCGA-A1-A0SH-01A-21-A13A-20 14-3-3_epsilon-M-C YWHAE -1.67822494 TCGA-A1-A0SH-01A-21-A13A-20 4E-BP1-R-V EIF4EBP1 -.985783228 TCGA-A1-A0SH-01A-21-A13A-20 4E-BP1_pS65-R-V EIF4EBP1 -2.048175673 TCGA-A1-A0SH-01A-21-A13A-20 4E-BP1_pT170-R-V EIF4EBP1 -1.77586419 TCGA-A1-A0SH-01A-21-A13A-20 4E-BP1_pT37-R-V EIF4EBP1 -.862053377 TCGA-A1-A0SH-01A-21-A13A-20 53BP1-R-C TP53BP1 .335938192 TCGA-A1-A0SH-01A-21-A13A-20 A-Raf_pS299-R-NA ARAF -1.834435719 TCGA-A1-A0SH-01A-21-A13A-20 ACC1-R-C ACACA 1.55282658 TCGA-A1-A0SH-01A-21-A13A-20 ACC_pS79-R-V ACACA ACACB 1.157762301 TCGA-A1-A0SH-01A-21-A13A-20 AIB1-M-V NCOA3 -1.664576512 TCGA-A1-A0SH-01A-21-A13A-20 AMPK_alpha-R-C PRKAA1 .320127335 TCGA-A1-A0SH-01A-21-A13A-20 AMPK_pT172-R-V PRKAA1 .766034414 TCGA-A1-A0SH-01A-21-A13A-20 ANLN-M-NA ANLN .1801224 TCGA-A1-A0SH-01A-21-A13A-20 AR-R-V AR -.420617981 TCGA-A1-A0SH-01A-21-A13A-20 ATM-R-NA ATM .775564969 TCGA-A1-A0SH-01A-21-A13A-20 Akt-R-V AKT1 AKT2 AKT3 1.065923643 TCGA-A1-A0SH-01A-21-A13A-20 Akt_pS473-R-V AKT1 AKT2 AKT3 -2.652059319 TCGA-A1-A0SH-01A-21-A13A-20 Akt_pT308-R-V AKT1 AKT2 AKT3 -1.738923662 TCGA-A1-A0SH-01A-21-A13A-20 Annexin_I-R-V ANXA1 2.669998774 TCGA-A1-A0SH-01A-21-A13A-20 B-Raf-M-NA BRAF 1.047794947 TCGA-A1-A0SH-01A-21-A13A-20 Bak-R-C BAK1 .113647172 TCGA-A1-A0SH-01A-21-A13A-20 Bax-R-V BAX -.328973894 TCGA-A1-A0SH-01A-21-A13A-20 Bcl-2-M-V BCL2 -1.119907939 TCGA-A1-A0SH-01A-21-A13A-20 Bcl-X-R-C BCL2L1 -1.160282433 TCGA-A1-A0SH-01A-21-A13A-20 Bcl-xL-R-C BCL2L1 -1.595755705 TCGA-A1-A0SH-01A-21-A13A-20 Beclin-G-V BECN1 .349502293 TCGA-A1-A0SH-01A-21-A13A-20 Bid-R-C BID -1.507368828 TCGA-A1-A0SH-01A-21-A13A-20 Bim-R-V BCL2L11 -1.512874633 TCGA-A1-A0SH-01A-21-A13A-20 C-Raf-R-V RAF1 -1.138128285 TCGA-A1-A0SH-01A-21-A13A-20 C-Raf_pS338-R-C RAF1 -1.354007525 TCGA-A1-A0SH-01A-21-A13A-20 CD31-M-V PECAM1 -1.036128465 TCGA-A1-A0SH-01A-21-A13A-20 CD49b-M-V ITGA2 -1.792887147 TCGA-A1-A0SH-01A-21-A13A-20 CDK1-R-V CDC2 -1.050946582 TCGA-A1-A0SH-01A-21-A13A-20 COX-2-R-C PTGS2 -.0192100890000002 TCGA-A1-A0SH-01A-21-A13A-20 Caspase-7_cleavedD198-R-C CASP7 -.0712527490000002 TCGA-A1-A0SH-01A-21-A13A-20 Caspase-8-M-C CASP8 -1.068814582 TCGA-A1-A0SH-01A-21-A13A-20 Caspase-9_cleavedD330-R-C CASP9 .130392783 TCGA-A1-A0SH-01A-21-A13A-20 Caveolin-1-R-V CAV1 1.521946107 TCGA-A1-A0SH-01A-21-A13A-20 Chk1-R-V CHEK1 .229670341 TCGA-A1-A0SH-01A-21-A13A-20 Chk1_pS345-R-C CHEK1 -.361120736 TCGA-A1-A0SH-01A-21-A13A-20 Chk2-M-C CHEK2 -1.123793594 TCGA-A1-A0SH-01A-21-A13A-20 Chk2_pT68-R-C CHEK2 -1.675743766 TCGA-A1-A0SH-01A-21-A13A-20 Claudin-7-R-V CLDN7 -.213575315 TCGA-A1-A0SH-01A-21-A13A-20 Collagen_VI-R-V COL6A1 .576715169 TCGA-A1-A0SH-01A-21-A13A-20 Cyclin_B1-R-V CCNB1 -2.346890282 TCGA-A1-A0SH-01A-21-A13A-20 Cyclin_D1-R-V CCND1 -.768558346 TCGA-A1-A0SH-01A-21-A13A-20 Cyclin_E1-M-V CCNE1 -2.837802362 TCGA-A1-A0SH-01A-21-A13A-20 DJ-1-R-C PARK7 .6189208 TCGA-A1-A0SH-01A-21-A13A-20 Dvl3-R-V DVL3 -.487591923 TCGA-A1-A0SH-01A-21-A13A-20 E-Cadherin-R-V CDH1 .791323016 TCGA-A1-A0SH-01A-21-A13A-20 EGFR-R-C EGFR -1.903522469 TCGA-A1-A0SH-01A-21-A13A-20 EGFR_pY1068-R-V EGFR -4.025825323 TCGA-A1-A0SH-01A-21-A13A-20 EGFR_pY1173-R-C EGFR -1.666953264 TCGA-A1-A0SH-01A-21-A13A-20 EGFR_pY992-R-V EGFR -1.022301508 TCGA-A1-A0SH-01A-21-A13A-20 ER-alpha-R-V ESR1 -.586459237 TCGA-A1-A0SH-01A-21-A13A-20 ER-alpha_pS118-R-V ESR1 -.160823973 TCGA-A1-A0SH-01A-21-A13A-20 ERCC1-M-C ERCC1 .539266595 TCGA-A1-A0SH-01A-21-A13A-20 ERK2-R-NA MAPK1 3.3943827 TCGA-A1-A0SH-01A-21-A13A-20 FAK-R-C PTK2 1.210696789 TCGA-A1-A0SH-01A-21-A13A-20 FOXO3a-R-C FOXO3 -.376259874 TCGA-A1-A0SH-01A-21-A13A-20 FOXO3a_pS318_S321-R-C FOXO3 .706874778 TCGA-A1-A0SH-01A-21-A13A-20 Fibronectin-R-C FN1 6.015520748 TCGA-A1-A0SH-01A-21-A13A-20 GAB2-R-V GAB2 -.536133289 TCGA-A1-A0SH-01A-21-A13A-20 GATA3-M-V GATA3 .167833491 TCGA-A1-A0SH-01A-21-A13A-20 GSK3-alpha-beta-M-V GSK3A GSK3B 2.169070018 TCGA-A1-A0SH-01A-21-A13A-20 GSK3-alpha-beta_pS21_S9-R-V GSK3A GSK3B 1.976985166 TCGA-A1-A0SH-01A-21-A13A-20 HER2-M-V ERBB2 .819798493 TCGA-A1-A0SH-01A-21-A13A-20 HER2_pY1248-R-V ERBB2 -.990038367 TCGA-A1-A0SH-01A-21-A13A-20 HER3-M-C ERBB3 .495512661 TCGA-A1-A0SH-01A-21-A13A-20 HER3_pY1298-R-V ERBB3 5.029477388 TCGA-A1-A0SH-01A-21-A13A-20 HSP70-R-C HSPA1A .438951819 TCGA-A1-A0SH-01A-21-A13A-20 IGF-1R-beta-R-C IGF1R -.452186544 TCGA-A1-A0SH-01A-21-A13A-20 IGFBP2-R-V IGFBP2 -.571109294 TCGA-A1-A0SH-01A-21-A13A-20 INPP4B-G-C INPP4B 1.795021833 TCGA-A1-A0SH-01A-21-A13A-20 IRS1-R-V IRS1 .596136506 TCGA-A1-A0SH-01A-21-A13A-20 JNK2-R-C MAPK9 -.722663373 TCGA-A1-A0SH-01A-21-A13A-20 K-Ras-M-C KRAS -.360102263 TCGA-A1-A0SH-01A-21-A13A-20 Ku80-R-C XRCC5 1.059825327 TCGA-A1-A0SH-01A-21-A13A-20 LBK1-M-NA STK11 .860558372 TCGA-A1-A0SH-01A-21-A13A-20 Lck-R-V LCK -1.490966553 TCGA-A1-A0SH-01A-21-A13A-20 MAPK_pT202_Y204-R-V MAPK1 MAPK3 2.044736908 TCGA-A1-A0SH-01A-21-A13A-20 MEK1-R-V MAP2K1 .999888043 TCGA-A1-A0SH-01A-21-A13A-20 MEK1_pS217_S221-R-V MAP2K1 1.042208538 TCGA-A1-A0SH-01A-21-A13A-20 MIG-6-M-V ERRFI1 -.756495361 TCGA-A1-A0SH-01A-21-A13A-20 MSH2-M-C MSH2 -1.032455113 TCGA-A1-A0SH-01A-21-A13A-20 MSH6-R-C MSH6 1.021644394 TCGA-A1-A0SH-01A-21-A13A-20 Mre11-R-C MRE11A .404688096 TCGA-A1-A0SH-01A-21-A13A-20 N-Cadherin-R-V CDH2 -1.833783475 TCGA-A1-A0SH-01A-21-A13A-20 NF-kB-p65_pS536-R-C NFKB1 -.476366124 TCGA-A1-A0SH-01A-21-A13A-20 NF2-R-C NF2 .0388711099999998 TCGA-A1-A0SH-01A-21-A13A-20 Notch1-R-V NOTCH1 -2.568810483 TCGA-A1-A0SH-01A-21-A13A-20 Notch3-R-C NOTCH3 .53469887 TCGA-A1-A0SH-01A-21-A13A-20 P-Cadherin-R-C CDH3 -1.214649181 TCGA-A1-A0SH-01A-21-A13A-20 PARP_cleaved-M-C PARP1 -2.353692889 TCGA-A1-A0SH-01A-21-A13A-20 PCNA-M-V PCNA -1.817588142 TCGA-A1-A0SH-01A-21-A13A-20 PDK1_pS241-R-V PDK1 -.0358623170000002 TCGA-A1-A0SH-01A-21-A13A-20 PI3K-p110-alpha-R-C PIK3CA -2.219139029 TCGA-A1-A0SH-01A-21-A13A-20 PKC-alpha-M-V PRKCA .948261229 TCGA-A1-A0SH-01A-21-A13A-20 PKC-alpha_pS657-R-V PRKCA -.691419135 TCGA-A1-A0SH-01A-21-A13A-20 PKC-delta_pS664-R-V PRKCD -.756370176 TCGA-A1-A0SH-01A-21-A13A-20 PR-R-V PGR .519157312 TCGA-A1-A0SH-01A-21-A13A-20 PRAS40_pT246-R-V AKT1S1 -1.06405689 TCGA-A1-A0SH-01A-21-A13A-20 PRDX1-R-NA PRDX1 -1.707425413 TCGA-A1-A0SH-01A-21-A13A-20 PTCH-R-C PTCH1 .953019438 TCGA-A1-A0SH-01A-21-A13A-20 PTEN-R-V PTEN .366433664 TCGA-A1-A0SH-01A-21-A13A-20 Paxillin-R-V PXN -.00505387600000019 TCGA-A1-A0SH-01A-21-A13A-20 Pea-15-R-V PEA15 .0934988209999998 TCGA-A1-A0SH-01A-21-A13A-20 RBM3-M-NA RBM3 1.377307557 TCGA-A1-A0SH-01A-21-A13A-20 Rab25-R-C RAB25 -2.182166639 TCGA-A1-A0SH-01A-21-A13A-20 Rad50-M-C RAD50 .0040017889999998 TCGA-A1-A0SH-01A-21-A13A-20 Rad51-M-C RAD51 -1.211311436 TCGA-A1-A0SH-01A-21-A13A-20 Rb-M-V RB1 -1.090275259 TCGA-A1-A0SH-01A-21-A13A-20 Rb_pS807_S811-R-V RB1 -1.027330814 TCGA-A1-A0SH-01A-21-A13A-20 S6-R-NA RPS6 -.47813201 TCGA-A1-A0SH-01A-21-A13A-20 S6_pS235_S236-R-V RPS6 -2.924317496 TCGA-A1-A0SH-01A-21-A13A-20 S6_pS240_S244-R-V RPS6 -1.57829696 TCGA-A1-A0SH-01A-21-A13A-20 SETD2-R-NA SETD2 -.783668571 TCGA-A1-A0SH-01A-21-A13A-20 STAT3_pY705-R-V STAT3 -1.822572593 TCGA-A1-A0SH-01A-21-A13A-20 STAT5-alpha-R-V STAT5A 1.765011299 TCGA-A1-A0SH-01A-21-A13A-20 Shc_pY317-R-NA SHC1 -3.15695054 TCGA-A1-A0SH-01A-21-A13A-20 Smac-M-V DIABLO -.481789067 TCGA-A1-A0SH-01A-21-A13A-20 Smad1-R-V SMAD1 .273876197 TCGA-A1-A0SH-01A-21-A13A-20 Smad3-R-V SMAD3 -1.497213896 TCGA-A1-A0SH-01A-21-A13A-20 Smad4-M-C SMAD4 -.372421734 TCGA-A1-A0SH-01A-21-A13A-20 Snail-M-C SNAI2 -1.93757681 TCGA-A1-A0SH-01A-21-A13A-20 Src-M-V SRC -1.223545521 TCGA-A1-A0SH-01A-21-A13A-20 Src_pY416-R-C SRC -2.382818887 TCGA-A1-A0SH-01A-21-A13A-20 Src_pY527-R-V SRC -1.945827624 TCGA-A1-A0SH-01A-21-A13A-20 Stathmin-R-V STMN1 -.934978598 TCGA-A1-A0SH-01A-21-A13A-20 Syk-M-V SYK -.254960651 TCGA-A1-A0SH-01A-21-A13A-20 TAZ_pS89-R-C WWTR1 .17240431 TCGA-A1-A0SH-01A-21-A13A-20 Tau-M-C MAPT -1.296297624 TCGA-A1-A0SH-01A-21-A13A-20 Transglutaminase-M-V TGM2 .984374989 TCGA-A1-A0SH-01A-21-A13A-20 Tuberin-R-C TSC2 -.177855898 TCGA-A1-A0SH-01A-21-A13A-20 VASP-R-C VASP .205647971 TCGA-A1-A0SH-01A-21-A13A-20 VEGFR2-R-C KDR 2.181629723 TCGA-A1-A0SH-01A-21-A13A-20 XBP1-G-C XBP1 .270304691 TCGA-A1-A0SH-01A-21-A13A-20 XIAP-R-C XIAP -1.215802115 TCGA-A1-A0SH-01A-21-A13A-20 XRCC1-R-C XRCC1 -.929601039 TCGA-A1-A0SH-01A-21-A13A-20 YAP-R-V YAP1 .636122532 TCGA-A1-A0SH-01A-21-A13A-20 YAP_pS127-R-C YAP1 1.240133261 TCGA-A1-A0SH-01A-21-A13A-20 YB-1-R-V YBX1 .615282839 TCGA-A1-A0SH-01A-21-A13A-20 YB-1_pS102-R-V YBX1 -1.128549313 TCGA-A1-A0SH-01A-21-A13A-20 alpha-Catenin-M-V CTNNA1 -.18872605 TCGA-A1-A0SH-01A-21-A13A-20 beta-Catenin-R-V CTNNB1 1.714190127 TCGA-A1-A0SH-01A-21-A13A-20 c-Jun_pS73-R-C JUN -1.688600882 TCGA-A1-A0SH-01A-21-A13A-20 c-Kit-R-V KIT -.925264549 TCGA-A1-A0SH-01A-21-A13A-20 c-Met-M-C MET -.0707010080000002 TCGA-A1-A0SH-01A-21-A13A-20 c-Met_pY1235-R-C MET -.929862789 TCGA-A1-A0SH-01A-21-A13A-20 c-Myc-R-C MYC -.769652768 TCGA-A1-A0SH-01A-21-A13A-20 cIAP-R-V BIRC2 .740095639 TCGA-A1-A0SH-01A-21-A13A-20 eEF2-R-V EEF2 -2.091887967 TCGA-A1-A0SH-01A-21-A13A-20 eEF2K-R-V EEF2K -1.004573595 TCGA-A1-A0SH-01A-21-A13A-20 eIF4E-R-V EIF4E .269511056 TCGA-A1-A0SH-01A-21-A13A-20 mTOR-R-V FRAP1 1.540299829 TCGA-A1-A0SH-01A-21-A13A-20 p21-R-C CDKN1A -.343205791 TCGA-A1-A0SH-01A-21-A13A-20 p27-R-V CDKN1B -1.002407964 TCGA-A1-A0SH-01A-21-A13A-20 p27_pT157-R-C CDKN1B -1.415363151 TCGA-A1-A0SH-01A-21-A13A-20 p27_pT198-R-V CDKN1B -1.969830076 TCGA-A1-A0SH-01A-21-A13A-20 p38_MAPK-R-C MAPK14 -.953504994 TCGA-A1-A0SH-01A-21-A13A-20 p38_pT180_Y182-R-V MAPK14 .330161624 TCGA-A1-A0SH-01A-21-A13A-20 p53-R-V TP53 -3.491647537 TCGA-A1-A0SH-01A-21-A13A-20 p70S6K-R-V RPS6KB1 .783030596 TCGA-A1-A0SH-01A-21-A13A-20 p70S6K_pT389-R-V RPS6KB1 -2.702947451 TCGA-A1-A0SH-01A-21-A13A-20 p90RSK_pT359_S363-R-C RPS6KA1 -.361234704