Hello,
I am trying to create a simple Manhattan plot for a small list of 200 SNPs
spread out in the genome in  different genes.
I have tried different functions (using ggplot2 and a function created by
Stephen Turner, mhtplot etc.)-none of them work smoothly.
Does anyone have a simple way to create the plot (not for all 22
chromosomes)- with the x axis showing the genes name and not the chromosomal
location.
Thanks a lot,
Einat

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