Hi All,

I have an CBS segmentation algorithm output for 10 tumor samples each from 2
different tumors.

Now, I am in an urgent need to assign gene (followed by all genes present)
that belong to a particular segment after I removed all the CNVs from
segment data. The format of the data is:

Sample  Chromosome      Start   End     Num_Probes      Segment_Mean
Sample1A-TA  1       51598   76187   15      -1.115

Could anyone suggest an R library or code or method that I can quickly use
to get the genes assigned to CBS output.

Thanks so much,
Angel

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