Hi
How to access the values in the output that is an object of S4 type. I tried
to access using subset ( [ ] ) but it is not allowed.
Any clue??

Thanks
-- Fahim



#My code is as follows:
require(IRanges);
query <- IRanges(c(1, 4, 9), c(5, 7, 10))
subject <- IRanges(c(2, 2, 10), c(2, 3, 12))
findOverlaps(query, subject)


Output of find overlap function is:
------------------
1> findOverlaps(query, tree)
An object of class "RangesMatching"
Slot "matchMatrix":
     query subject
[1,]     1       1
[2,]     1       2
[3,]     3       2

Slot "DIM":
[1] 4 3
--------------------

How to access the values in the output?

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