Hi,

I met with this error message with the following data set. Do you know how 
to resolve it? Thanks.


> data<-read.table("c://temp3//abc.csv", sep = ",", header=T)
> classwt<-c( 0.5806452, 0.4193548)
> y<-data[,1]
> x<-data[,2:ncol(data)]
> print(y)
 [1] 1 1 1 1 1 1 1 1 1 2 2 2 2 2 2 1 1 1 1 1 1 1 1 1 2 2 2 2 2 2 1 1 1 1 1
[36] 1 1 1 1 2 2 2 2 2 2 2 1 1 1 1 1 1 1 1 1 2 2 2 2 2 2 2
> print(x)
   rs2289472 rs1551398 rs7927894
1         CT        AA        CT
2         TT        AA        CC
3         TT        AG        TT
4         TT        AA        CT
5         CC        AA        CT
6         CT        AA        CT
7         TT        AA        CT
8         CT        AG        CT
9         CC        AA        CT
10        TT        AG        TT
11        CT        GG        CC
12        CT        GG        CC
13        CT        AG        CC
14        CT        AG        TT
15        CT        AA        CT
16        TT        AA        CT
17        CT        AG        CT
18        TT        AA        CT
19        TT        AA        TT
20        CT        AG        CT
21        CT        AG        TT
22        CT        AA        CT
23        TT        AA        CT
24        CC        AA        CC
25        CT        AG        CC
26        CT        AG        CT
27        CT        GG        CT
28        CT        AG        CC
29        CT        GG        CC
30        TT        GG        CT
31        CT        AG        CT
32        TT        AG        TT
33        CC        GG        CC
34        TT        AA        CT
35        CT        GG        TT
36        TT        AG        CT
37        CT        AG        CC
38        TT        AA        CC
39        TT        AA        TT
40        TT        AA        TT
41        CT        GG        CT
42        CT        AG        TT
43        TT        AA        CT
44        CT        AG        CC
45        TT        AG        CC
46        CT        AA        CC
47        CC        AA        CT
48        CT        AA        CT
49        CC        AA        CC
50        TT        AA        TT
51        TT        GG        CT
52        CT        AG        CT
53        TT        AG        TT
54        TT        AA        CT
55        CT        AA        CC
56        CT        AG        CT
57        CT        AG        CC
58        CT        AA        CC
59        CT        AG        CC
60        CT        AG        TT
61        TT        AA        CC
62        TT        GG        CT
> svm.fit=svm(y=as.factor(y),x=x,class.weights = classwt)
Error in if (any(co)) { : missing value where TRUE/FALSE needed
In addition: Warning messages:
1: In FUN(newX[, i], ...) : NAs introduced by coercion
2: In FUN(newX[, i], ...) : NAs introduced by coercion
3: In FUN(newX[, i], ...) : NAs introduced by coercion
> 


Xumin
	[[alternative HTML version deleted]]

