Hi, All;

I tried to install exon.pmcdf_1.1.tar.gz package using install.packages()
but it didn't with the following messages:

> install.packages('/Users/thchung/Downloads/exon.pmcdf_1.1.tar.gz',
repos=NULL)
Error in gzfile(file, "r") : cannot open the connection
In addition: Warning message:
In gzfile(file, "r") :
  cannot open compressed file 'exon.pmcdf_1.1.tar.gz/DESCRIPTION', probable
reason 'No such file or directory'
> sessionInfo()
R version 2.7.2 beta (2008-08-16 r46368)
i386-apple-darwin9.4.0

locale:
C

attached base packages:
[1] splines   tools     stats     graphics  grDevices utils     datasets
[8] methods   base

other attached packages:
 [1] exonmap_1.6.05       plier_1.10.0         RMySQL_0.6-0
 [4] DBI_0.2-4            RColorBrewer_1.0-2   simpleaffy_2.16.0
 [7] gcrma_2.12.1         matchprobes_1.12.0   genefilter_1.20.0
[10] survival_2.34-1      affy_1.18.2          preprocessCore_1.2.1
[13] affyio_1.8.0         Biobase_2.0.1

loaded via a namespace (and not attached):
[1] AnnotationDbi_1.2.2 RSQLite_0.6-9       annotate_1.18.0

Surprisingly, the R CMD INSTALL mechanism worked:

BiobankMacBookPro:Downloads thchung$ R CMD INSTALL exon.pmcdf_1.1.tar.gz
* Installing to library '/Library/Frameworks/R.framework/Resources/library'
* Installing *source* package 'exon.pmcdf' ...
** R
** data
** help
 >>> Building/Updating help pages for package 'exon.pmcdf'
     Formats: text html latex example
  exon.pmcdf                        text    html    latex
  geometry                          text    html    latex   example
** building package indices ...
* DONE (exon.pmcdf)

Can anyone tell me what the problem is? Thanks in advance,

Tae-Hoon

-- 
Tae-Hoon Chung

Korea Centers for Disease Control & Prevention (KCDC)
Korea National Institute of Health
Center for Genome Sciences :: Biobank Team

(T) +82-2-380-2252
(F) +82-2-354-1078
(M) +82-10-3511-1012

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