Hi, All;

I simply followed the exonmap vignette  but came up with an unexpected
error.
Here are what I did:

> library(exonmap)
Loading required package: affy
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: affyio
Loading required package: preprocessCore
Loading required package: simpleaffy
Loading required package: genefilter
Loading required package: survival
Loading required package: splines
Loading required package: gcrma
Loading required package: matchprobes
Loading required package: RColorBrewer
Loading required package: RMySQL
Loading required package: DBI
Loading required package: plier

> raw <- read.exon(covdesc='design.csv')
> raw@cdfName <- "exon.pmcdf"
> dat.rma <- rma(raw)
Error in .local(object, ...) : subscript out of bounds
> sessionInfo()
R version 2.7.2 beta (2008-08-16 r46368)
i386-apple-darwin9.4.0

locale:
C

attached base packages:
[1] splines   tools     stats     graphics  grDevices utils     datasets
[8] methods   base

other attached packages:
 [1] exon.pmcdf_1.1       exonmap_1.6.05       plier_1.8.0
 [4] RMySQL_0.6-0         DBI_0.2-4            RColorBrewer_1.0-2
 [7] simpleaffy_2.14.05   gcrma_2.12.1         matchprobes_1.12.0
[10] genefilter_1.20.0    survival_2.34-1      affy_1.16.0
[13] preprocessCore_1.0.0 affyio_1.6.1         Biobase_2.0.1

loaded via a namespace (and not attached):
[1] AnnotationDbi_1.0.6 RSQLite_0.6-4       annotate_1.18.0

Thanks in advance;

Tae-Hoon

-- 
Tae-Hoon Chung

Korea Centers for Disease Control & Prevention (KCDC)
Korea National Institute of Health
Center for Genome Sciences :: Biobank Team

(T) +82-2-380-2252
(F) +82-2-354-1078
(M) +82-10-3511-1012

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