Hi all,

I think you are both right. Multiple scales are not a good idea. I think I'll go with the two graphs idea that John suggested. It is way better than trying to superimpose two scales.

thanks a lot!!

Tim


Scionforbai <scionforbai@gmail.com> wrote: plot(x1,y1,"b",xlim=range(x1), ylim=c(0, 170),pch=16,cex=2,axes=FALSE,ann=FALSE)
par(col="grey50", fg="grey50", col.axis="grey50")
axis(1, at=seq(0, 16, 4))
axis(2, at=seq(0, 170, 10))
axis(4, at=seq(0, 170, 10))
par(new=TRUE)
plot(x2,y2,"b",xlim=range(x2), ylim=c(0, 170),pch=21,cex=2,axes=FALSE,ann=FALSE)
axis(3, at=seq(0, 70, 10))
box(bty="u")
mtext("k", side=1, line=2, cex=0.8)
mtext("GO terms", side=2, line=2, las=0, cex=0.8)
mtext("Num clusters", side=3, line=2, las=0, cex=0.8)
mtext("GO terms", side=4, line=2, las=0, cex=0.8)

But I don't see the point of double scale.


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