I have been using Hapassoc a R module for analyzing haplotypes in genetics. It uses a GLM approach. One of the things it does is to infer haplotypes in people with uncertain genotype phases, the estimation of ORs is based on this inferred haplotype frequencies. I want to report the number of observations that are used for the GLM model analysis. Does anyone know how to do this?
Is there a way to obtain a table of observed/expected frequencies from the GLMs?
 
Thank you
 
Fabio 

Fabio Sánchez, MD, MSc, PhD 
Molecular Dermatology 
Department of Medicine 
Karolinska Institute 
SE-17176 Karolinska University Hospital 
Tel: +46 8 51772158

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