[R] ggplot2: Get the regression line with 95% confidence bands
varin sacha
v@r|n@@ch@ @end|ng |rom y@hoo@|r
Tue Dec 12 22:19:12 CET 2023
Dear Ben,
Dear Daniel,
Dear Rui,
Dear Bert,
Here below my R code.
I really appreciate all your comments. My R code is perfectly working but there is still something I would like to improve. The X-axis is showing 2012.5 ; 2015.0 ; 2017.5 ; 2020.0
I would like to see on X-axis only the year (2012 ; 2015 ; 2017 ; 2020). How to do?
#########
library(ggplot2)
df=data.frame(year= c(2012,2015,2018,2022), score=c(495,493, 495, 474))
ggplot(df, aes(x = year, y = score)) + geom_point() + geom_smooth(method = "lm", formula = y ~ x) +
labs(title = "Standard linear regression for France", x = "Year", y = "PISA score in mathematics") + scale_y_continuous(limits=c(470,500),oob=scales::squish)
#########
Le lundi 11 décembre 2023 à 23:38:06 UTC+1, Ben Bolker <bbolker using gmail.com> a écrit :
On 2023-12-11 5:27 p.m., Daniel Nordlund wrote:
> On 12/10/2023 2:50 PM, Rui Barradas wrote:
>> Às 22:35 de 10/12/2023, varin sacha via R-help escreveu:
>>>
>>> Dear R-experts,
>>>
>>> Here below my R code, as my X-axis is "year", I must be missing one
>>> or more steps! I am trying to get the regression line with the 95%
>>> confidence bands around the regression line. Any help would be
>>> appreciated.
>>>
>>> Best,
>>> S.
>>>
>>>
>>> #############################################
>>> library(ggplot2)
>>> df=data.frame(year=factor(c("2012","2015","2018","2022")),
>>> score=c(495,493, 495, 474))
>>> ggplot(df, aes(x=year, y=score)) + geom_point( ) +
>>> geom_smooth(method="lm", formula = score ~ factor(year), data = df) +
>>> labs(title="Standard linear regression for France", y="PISA score in
>>> mathematics") + ylim(470, 500)
>>> #############################################
>>>
>>> ______________________________________________
>>> R-help using r-project.org mailing list -- To UNSUBSCRIBE and more, see
>>> https://stat.ethz.ch/mailman/listinfo/r-help
>>> PLEASE do read the posting guide
>>> http://www.R-project.org/posting-guide.html
>>> and provide commented, minimal, self-contained, reproducible code.
>> Hello,
>>
>> I don't see a reason why year should be a factor and the formula in
>> geom_smooth is wrong, it should be y ~ x, the aesthetics envolved.
>> It still doesn't plot the CI's though. There's a warning and I am not
>> understanding where it comes from. But the regression line is plotted.
>>
>>
>>
>> ggplot(df, aes(x = as.numeric(year), y = score)) +
>> geom_point() +
>> geom_smooth(method = "lm", formula = y ~ x) +
>> labs(
>> title = "Standard linear regression for France",
>> x = "Year",
>> y = "PISA score in mathematics"
>> ) +
>> ylim(470, 500)
>> #> Warning message:
>> #> In max(ids, na.rm = TRUE) : no non-missing arguments to max;
>> returning -Inf
>>
>>
>>
>> Hope this helps,
>>
>> Rui Barradas
>>
>>
>>
> After playing with this for a little while, I realized that the problem
> with plotting the confidence limits is the addition of ylim(470, 500).
> The confidence values are outside the ylim values. Remove the limits,
> or increase the range, and the confidence curves will plot.
>
> Hope this is helpful,
>
> Dan
>
Or use + scale_y_continuous(limits = c(470, 500), oob = scales::squish)
______________________________________________
R-help using r-project.org mailing list -- To UNSUBSCRIBE and more, see
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
More information about the R-help
mailing list