[R] ERROR with Aggregate differentially expressed genes across all contrast results using DEVis/DESeq

Ivan Krylov kry|ov@r00t @end|ng |rom gm@||@com
Wed Jun 29 22:01:50 CEST 2022

On Wed, 29 Jun 2022 14:14:05 -0500
Ana Ruiz Manzano <aruizman2 using gmail.com> wrote:

> I previously posted this in the Bioconductor forum but then sent me
> to you.

The next step would be using traceback() to look at the call stack at
the time of the error. It should tell you the names of the functions
that were active when your code crashed.

Use getMethod() to obtain access to the S4 methods at runtime or read
the source code of the package and try to find out where did the NULL
come from. See also ?getAnywhere.

Alternatively, use options(error = recover) to land in a debugger
when the error happens and take a look at the variables as they are
(see ?browser for more information on the debugger). Which variable is
NULL despite the expectations of the code? Where did it come from?

Best regards,

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