[R] Microbiome 16S amplicon analysis in dada2
jdnewm|| @end|ng |rom dcn@d@v|@@c@@u@
Sun Aug 21 00:10:23 CEST 2022
1) The Posting Guide warns you to use a search engine to familiarize yourself with the obvious answers before posting. "fastq file r" brought up quite a bunch of promising results. If those results are not useful, do expand on why they weren't when asking anyone for further help.
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3) There is usually more than one way to import files of any type... and the choice you make could be poorly matched to the size of your data or the type of analysis. Do ask this "best practice" question in the Bioconductor help area  where you can find many more experts in this specialized use of R than here. Try to be a bit more complete in your question so they can offer informed answers relevant to the size and scope of your analysis.
On August 20, 2022 2:13:20 PM PDT, Anas Jamshed <anasjamshed1994 using gmail.com> wrote:
>I've 80 FASTQ files ( 40F and 40R) for C57BL6 mice microbiome sequencing in
>80 different folders and all are paired-end. How can I upload all of them
>in R for dada2 analysis?
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