[R] [External] add equation and rsqared to plot

Wed Apr 6 23:36:01 CEST 2022

Hallo David

Thanks for your answer. atop itself somehow cannot use expression made by substitute  although those expressions itself are correct. I asked this question after roughly two hours of unsuccessful atempts.

The second substitute or bquote solves the problem. Maybe this could propagate to help page, because although atop works smoothly with simple expressions, expressions with substitute are treated in a wrong way (at least by my opinion).

Thanks again.

Best regards.
Petr

________________________________________
Od: David Winsemius <dwinsemius using comcast.net>
Odesláno: 6. dubna 2022 23:20
Komu: PIKAL Petr; Richard M. Heiberger
Kopie: r-help using r-project.org
Předmět: Re: [R] [External] add equation and rsqared to plot

Try this:

lm_eqn = function(m) {
     l <- list(a = format(coef(m)[1], digits = 4),
               b = format(abs(coef(m)[2]), digits = 4),
               r2 = format(summary(m)$r.squared, digits = 3),
               r2adj = format(summary(m)$adj.r.squared, digits = 3));
     if (coef(m)[2] >= 0)  {
         eq <- substitute(italic(y) == a + b %.% italic(x), l)
     } else {
         eq <- substitute(italic(y) == a - b %.% italic(x),l)

     }
     req <- substitute(italic(r)^2~"="~r2* ","~~italic(adj.r)^2~"="~r2adj,l)
     a_regs <- substitute( atop(eq, req), list(eq=eq,req=req))
}

--

David.

On 4/6/22 13:47, PIKAL Petr wrote:
> Hallo Richard.
>
> Did you try the example? I Used atop but with the syntax I made, the result is
>
> eq
> req
>
> but not the equations.
>
> I send the picture, but I am not sure if it will go through.
>
> Best regards
> Petr
>
> ________________________________________
> Od: Richard M. Heiberger <rmh using temple.edu>
> Odesláno: 6. dubna 2022 22:36
> Komu: PIKAL Petr
> Kopie: r-help using r-project.org
> Předmět: Re: [External] [R] add equation and rsqared to plot
>
> I think you are looking for atop(a,b)
> See ? plotmath
>
>> On Apr 06, 2022, at 15:58, PIKAL Petr <petr.pikal using precheza.cz> wrote:
>>
>> Dear all
>>
>>
>> I want to add equation and rsquared values to plot and I am lost in correct expression form. I want to have 2 lines, one with equation and one with r squared values.
>>
>>
>> Here is what I made.
>>
>> # function to extract values from lm fit.
>>
>>
>> lm_eqn = function(m) {
>>   l <- list(a = format(coef(m)[1], digits = 4),
>>       b = format(abs(coef(m)[2]), digits = 4),
>>       r2 = format(summary(m)$r.squared, digits = 3),
>>       r2adj = format(summary(m)$adj.r.squared, digits = 3));
>>   if (coef(m)[2] >= 0)  {
>>     eq <- substitute(italic(y) == a + b %.% italic(x), l)
>>   } else {
>>     eq <- substitute(italic(y) == a - b %.% italic(x),l)
>>
>>   }
>>   req <- substitute(italic(r)^2~"="~r2* ","~~italic(adj.r)^2~"="~r2adj,l)
>>   expression(atop(eq, req))
>> }
>>
>>
>> #Example
>>
>> x <- 1:10
>> y <- x*5 +rnorm(10)
>> plot(x,y)
>> fit <- lm(y~x)
>> text(4,40, lm_eqn(fit))
>>
>>
>> I know that both eq and req are correct expressions and when the last line in function is either eq or req, the example gives correct result.
>>
>>
>> But how to get both expressions one above the other is mystery.
>>
>> Please help.
>>
>>
>> Best regards.
>>
>> Petr
>>
>>
>>
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> ______________________________________________
> R-help using r-project.org mailing list -- To UNSUBSCRIBE and more, see
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.