[R] help finding a starting point to diagnose inability to install or update packages
jdnewm|| @end|ng |rom dcn@d@v|@@c@@u@
Sun Apr 25 18:47:21 CEST 2021
These are all contributed packages... don't file a bug report on R. Also, tidyverse is a rediculously sprawling meta-package that seems prone to faulty dependency data.
If you have a oroblem getting the right version of broom then focus on solving that. One possibility is that your CRAN mirror is not up-to-date.. try a different one or wait a few days for the updates to prooagate. Sometimes all it takes is to update or re-install the offending package. If you want to push the envelope you can use devtools::install_github or similar to bypass CRAN, but it is possible that that version had a problem identified in the CRAN review that you might have trouble with.
Whst is your options("repos") set to?
On April 25, 2021 7:52:28 AM PDT, Larry Johnson <larry.johnson using cobbcountycourier.com> wrote:
>Hi. Short version. tidyverse disappeared from my packages, and won't
>install. The initial failure stated I had an outdated broom package,
>but updates are failing too, not just on broom, but on all packages,
>and there is no meaningful error output on the installation failures.
>I typically use RStudio on Fedora 33, but the problem I'm about to
>describe occurs whether I use RStudio or the text version.
>To give you overview, here is the output from sessionInfo:
>R version 4.0.4 (2021-02-15)
>Platform: x86_64-redhat-linux-gnu (64-bit)
>Running under: Fedora 33 (Workstation Edition)
>Matrix products: default
>  LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
>  LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
>  LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
>  LC_PAPER=en_US.UTF-8 LC_NAME=C
>  LC_ADDRESS=C LC_TELEPHONE=C
> LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
>attached base packages:
> stats graphics grDevices datasets utils methods base
>loaded via a namespace (and not attached):
> htmlwidgets_1.5.3 colorspace_2.0-0 scales_1.1.1
> magrittr_2.0.1 R6_2.5.0 leaflet_22.214.171.124
> tools_4.0.4 crosstalk_1.1.1 digest_0.6.27
> munsell_0.5.0 rlang_0.4.10 CoprManager_0.3.7.1
>After trying complete reinstalls of R, RStudio, and the CRAN
>repositories here's the last error messages I've gotten in my attempts
>to install and load tidyverse:
>> install.packages(c("broom", "callr", "cli", "cpp11", "dbplyr",
>"haven", "highr", "knitr", "pillar", "processx", "RcppArmadillo",
>"reprex", "tibble", "tinytex", "vctrs", "viridis", "viridisLite",
>Install system packages...
>Install system packages...
>Error: package or namespace load failed for ‘tidyverse’ in
>loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck =
> namespace ‘broom’ 0.7.5 is being loaded, but >= 0.7.6 is required
>Attempts to install or update broom fail with no output.
>I've been searching for similar reports of failure here in these
>archives, on the RStudio forums, and on the internet and have found
>nothing that's a seamless match. If I can't find anything I'll check
>out filing a bug report (I've never done it with R before).
>Any help with a starting point in diagnosing this will be appreciated.
>Editor and Publisher
>Cobb County Courier
> [[alternative HTML version deleted]]
>R-help using r-project.org mailing list -- To UNSUBSCRIBE and more, see
>PLEASE do read the posting guide
>and provide commented, minimal, self-contained, reproducible code.
Sent from my phone. Please excuse my brevity.
More information about the R-help