[R] Weighted violin chart
chr|@ho|d @end|ng |rom p@yctc@org
Tue Apr 13 08:32:55 CEST 2021
----- Original Message -----
> From: "Mahmood Naderan-Tahan" <mahmood.naderan using ugent.be>
> To: r-help using r-project.org
> Sent: Monday, 12 April, 2021 21:01:18
> Subject: [R] Weighted violin chart
> I would like to know if it is possible to plot a weighted violin chart with R.
> Currently, I have
>> mydata <- read.csv('test.csv', header=T,row.names=1)
> V1 V2 V3
> P1 73.6 50 R
> P2 75.2 20 R
> P3 6.5 5 R
> P4 41.4 10 C
> P5 5.4 10 C
> P6 18.8 5 C
>> p <- ggplot(mydata, aes(x=V3, y=V1)) + geom_violin(trim=FALSE)
>> p + geom_dotplot(binaxis='y', stackdir='center', dotsize=1)
> I would like to use V2 as the weight vector. Any idea about that?
There are, of course, nice ways to do this using base R but I am trying to convert to using tidyverse.
Here is one:
### use tribble to create a tibble rowwise
~V1, ~V2, ~V3,
73.6, 50, "R",
75.2, 20, "R",
6.5, 5, "R",
41.4, 10, "C",
5.4, 10, "C",
18.8, 5, "C") -> myData
### use tidyr::uncount() to get to the data you want
uncount(V2) -> tibWtdMyData
### plot it
aes(x=V3, y=V1)) +
geom_dotplot(binaxis='y', stackdir='center', dotsize=1)
Of course, with so many identical values, I'm not sure a violin plot makes sense but perhaps you
were showing us a small subset of your data.
I have a nasty feeling there is a way of weighting things within ggplot. If so, I am sure someone
will tell us.
For future, it's much easier for us to reply if you put small bits of data like your myData into
your Email using dput. The output from dput doesn't look terribly human friendly but unless it
is mangled by HTML Emailing, it is wonderfully human friendly to use!
Very best (all),
Chris Evans (he/him) <chris using psyctc.org> Visiting Professor, University of Sheffield <chris.evans using sheffield.ac.uk>
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